Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 GK-202ENST00000378941 458 ntTSL 3 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 CDC14C-201ENST00000428251 1719 ntBASIC19.15■□□□□ 0.66
PDS5AQ29RF7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDS5AQ29RF7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PDS5AQ29RF7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 OR8S1-201ENST00000310194 1080 ntBASIC19.14■□□□□ 0.65
PDS5AQ29RF7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.14■□□□□ 0.65
PDS5AQ29RF7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.13■□□□□ 0.65
PDS5AQ29RF7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 FAM86LP-201ENST00000478302 853 ntBASIC19.13■□□□□ 0.65
PDS5AQ29RF7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 AC132938.2-201ENST00000579188 680 ntBASIC19.13■□□□□ 0.65
PDS5AQ29RF7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 RPSAP52-203ENST00000622976 1023 ntBASIC19.13■□□□□ 0.65
PDS5AQ29RF7 AL591163.1-201ENST00000641757 987 ntBASIC19.13■□□□□ 0.65
PDS5AQ29RF7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.13■□□□□ 0.65
PDS5AQ29RF7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms