Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC126335.2-201ENST00000623362 4637 ntBASIC14.47□□□□□ -0.09
SCN1BQ07699 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SCN1BQ07699 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SCN1BQ07699 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCN1BQ07699 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCN1BQ07699 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCN1BQ07699 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.47□□□□□ -0.09
SCN1BQ07699 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCN1BQ07699 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SCN1BQ07699 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SCN1BQ07699 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.46□□□□□ -0.09
SCN1BQ07699 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SCN1BQ07699 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SCN1BQ07699 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
SCN1BQ07699 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
SCN1BQ07699 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.46□□□□□ -0.09
SCN1BQ07699 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SCN1BQ07699 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.46□□□□□ -0.09
SCN1BQ07699 UPK3BP1-201ENST00000428678 509 ntBASIC14.46□□□□□ -0.09
SCN1BQ07699 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SCN1BQ07699 FOSL1P1-201ENST00000511041 816 ntBASIC14.46□□□□□ -0.09
SCN1BQ07699 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SCN1BQ07699 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.46□□□□□ -0.09
SCN1BQ07699 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.46□□□□□ -0.09
SCN1BQ07699 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.46□□□□□ -0.09
SCN1BQ07699 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SCN1BQ07699 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.46□□□□□ -0.09
SCN1BQ07699 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.46□□□□□ -0.09
SCN1BQ07699 AP000867.4-201ENST00000641616 219 ntBASIC14.46□□□□□ -0.09
SCN1BQ07699 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SCN1BQ07699 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN1BQ07699 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SCN1BQ07699 AC069224.1-201ENST00000566372 1715 ntBASIC14.46□□□□□ -0.1
SCN1BQ07699 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SCN1BQ07699 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
SCN1BQ07699 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.46□□□□□ -0.1
SCN1BQ07699 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SCN1BQ07699 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.46□□□□□ -0.1
SCN1BQ07699 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SCN1BQ07699 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SCN1BQ07699 AC007191.1-201ENST00000623179 2995 ntBASIC14.46□□□□□ -0.1
SCN1BQ07699 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.46□□□□□ -0.1
SCN1BQ07699 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
SCN1BQ07699 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SCN1BQ07699 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN1BQ07699 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCN1BQ07699 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.45□□□□□ -0.1
SCN1BQ07699 AC138969.2-201ENST00000532739 9932 ntBASIC14.45□□□□□ -0.1
SCN1BQ07699 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN1BQ07699 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCN1BQ07699 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.45□□□□□ -0.1
SCN1BQ07699 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN1BQ07699 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.45□□□□□ -0.1
SCN1BQ07699 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
SCN1BQ07699 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN1BQ07699 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN1BQ07699 SPDYE21P-201ENST00000413323 827 ntBASIC14.45□□□□□ -0.1
SCN1BQ07699 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.45□□□□□ -0.1
SCN1BQ07699 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.45□□□□□ -0.1
SCN1BQ07699 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.45□□□□□ -0.1
SCN1BQ07699 KRT16P4-201ENST00000453883 522 ntBASIC14.45□□□□□ -0.1
SCN1BQ07699 AC132008.2-207ENST00000454517 770 ntBASIC14.45□□□□□ -0.1
SCN1BQ07699 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.45□□□□□ -0.1
SCN1BQ07699 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SCN1BQ07699 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.45□□□□□ -0.1
SCN1BQ07699 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SCN1BQ07699 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.45□□□□□ -0.1
SCN1BQ07699 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.45□□□□□ -0.1
SCN1BQ07699 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SCN1BQ07699 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN1BQ07699 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN1BQ07699 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SCN1BQ07699 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.45□□□□□ -0.1
SCN1BQ07699 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms