Protein–RNA interactions for Protein: P98173

FAM3A, Protein FAM3A, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3AP98173 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FAM3AP98173 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FAM3AP98173 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.02□□□□□ -0.16
FAM3AP98173 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FAM3AP98173 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FAM3AP98173 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FAM3AP98173 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
FAM3AP98173 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FAM3AP98173 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.02□□□□□ -0.16
FAM3AP98173 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FAM3AP98173 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
FAM3AP98173 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.02□□□□□ -0.16
FAM3AP98173 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
FAM3AP98173 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
FAM3AP98173 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 HAUS4P1-201ENST00000406739 1145 ntBASIC14.02□□□□□ -0.17
FAM3AP98173 TFAMP1-201ENST00000412727 736 ntBASIC14.02□□□□□ -0.17
FAM3AP98173 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.02□□□□□ -0.17
FAM3AP98173 MCCD1P2-201ENST00000423228 335 ntBASIC14.02□□□□□ -0.17
FAM3AP98173 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.02□□□□□ -0.17
FAM3AP98173 AC245100.5-201ENST00000452108 331 ntBASIC14.02□□□□□ -0.17
FAM3AP98173 POLD2P1-201ENST00000511220 997 ntBASIC14.02□□□□□ -0.17
FAM3AP98173 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.02□□□□□ -0.17
FAM3AP98173 AL135744.1-201ENST00000565098 629 ntBASIC14.02□□□□□ -0.17
FAM3AP98173 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 MIR4321-201ENST00000592276 80 ntBASIC14.02□□□□□ -0.17
FAM3AP98173 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
FAM3AP98173 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
FAM3AP98173 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.02□□□□□ -0.17
FAM3AP98173 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
FAM3AP98173 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
FAM3AP98173 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.02□□□□□ -0.17
FAM3AP98173 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.02□□□□□ -0.17
FAM3AP98173 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.02□□□□□ -0.17
FAM3AP98173 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.02□□□□□ -0.17
FAM3AP98173 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM3AP98173 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
FAM3AP98173 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.01□□□□□ -0.17
FAM3AP98173 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.01□□□□□ -0.17
FAM3AP98173 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.01□□□□□ -0.17
FAM3AP98173 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
FAM3AP98173 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.01□□□□□ -0.17
FAM3AP98173 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
FAM3AP98173 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
FAM3AP98173 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.01□□□□□ -0.17
FAM3AP98173 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.01□□□□□ -0.17
FAM3AP98173 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.01□□□□□ -0.17
FAM3AP98173 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.01□□□□□ -0.17
FAM3AP98173 AC105233.2-201ENST00000523697 349 ntBASIC14.01□□□□□ -0.17
FAM3AP98173 FAM86C2P-203ENST00000528684 1004 ntBASIC14.01□□□□□ -0.17
FAM3AP98173 AF228730.5-201ENST00000530288 346 ntBASIC14.01□□□□□ -0.17
FAM3AP98173 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
FAM3AP98173 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.01□□□□□ -0.17
FAM3AP98173 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.01□□□□□ -0.17
FAM3AP98173 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.01□□□□□ -0.17
FAM3AP98173 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.01□□□□□ -0.17
FAM3AP98173 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
FAM3AP98173 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.01□□□□□ -0.17
FAM3AP98173 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.01□□□□□ -0.17
FAM3AP98173 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.01□□□□□ -0.17
FAM3AP98173 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.01□□□□□ -0.17
FAM3AP98173 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM3AP98173 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.01□□□□□ -0.17
FAM3AP98173 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms