Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CX3CL1P78423 LINC02228-204ENST00000642115 2962 ntBASIC13.06□□□□□ -0.32
CX3CL1P78423 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
CX3CL1P78423 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CX3CL1P78423 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CX3CL1P78423 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.06□□□□□ -0.32
CX3CL1P78423 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CX3CL1P78423 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.06□□□□□ -0.32
CX3CL1P78423 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 YBX2P1-201ENST00000394192 760 ntBASIC13.06□□□□□ -0.32
CX3CL1P78423 AL671277.1-201ENST00000429656 993 ntBASIC13.06□□□□□ -0.32
CX3CL1P78423 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.06□□□□□ -0.32
CX3CL1P78423 RARRES2P8-201ENST00000566335 367 ntBASIC13.06□□□□□ -0.32
CX3CL1P78423 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.06□□□□□ -0.32
CX3CL1P78423 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 AC092902.6-201ENST00000641783 218 ntBASIC13.06□□□□□ -0.32
CX3CL1P78423 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CX3CL1P78423 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CX3CL1P78423 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CX3CL1P78423 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.06□□□□□ -0.32
CX3CL1P78423 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.06□□□□□ -0.32
CX3CL1P78423 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CX3CL1P78423 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CX3CL1P78423 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.06□□□□□ -0.32
CX3CL1P78423 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CX3CL1P78423 AC144831.1-201ENST00000573312 2656 ntBASIC13.06□□□□□ -0.32
CX3CL1P78423 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.05□□□□□ -0.32
CX3CL1P78423 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CX3CL1P78423 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.05□□□□□ -0.32
CX3CL1P78423 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.05□□□□□ -0.32
CX3CL1P78423 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CX3CL1P78423 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.05□□□□□ -0.32
CX3CL1P78423 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.05□□□□□ -0.32
CX3CL1P78423 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
CX3CL1P78423 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.05□□□□□ -0.32
CX3CL1P78423 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.05□□□□□ -0.32
CX3CL1P78423 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CX3CL1P78423 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.05□□□□□ -0.32
CX3CL1P78423 DNAJB3-201ENST00000446806 729 ntBASIC13.05□□□□□ -0.32
CX3CL1P78423 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.05□□□□□ -0.32
CX3CL1P78423 FAM86C2P-203ENST00000528684 1004 ntBASIC13.05□□□□□ -0.32
CX3CL1P78423 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.05□□□□□ -0.32
CX3CL1P78423 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.05□□□□□ -0.32
CX3CL1P78423 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.05□□□□□ -0.32
CX3CL1P78423 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.05□□□□□ -0.32
CX3CL1P78423 AKAP8P1-201ENST00000434743 1349 ntBASIC13.05□□□□□ -0.32
CX3CL1P78423 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.05□□□□□ -0.32
CX3CL1P78423 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CX3CL1P78423 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.05□□□□□ -0.32
CX3CL1P78423 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.05□□□□□ -0.32
CX3CL1P78423 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.05□□□□□ -0.32
CX3CL1P78423 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.05□□□□□ -0.32
CX3CL1P78423 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CL1P78423 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
CX3CL1P78423 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms