Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.79■□□□□ 0.6
IRX3P78415 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.79■□□□□ 0.6
IRX3P78415 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.79■□□□□ 0.6
IRX3P78415 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.79■□□□□ 0.6
IRX3P78415 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.79■□□□□ 0.6
IRX3P78415 KRT17P8-201ENST00000540749 863 ntBASIC18.79■□□□□ 0.6
IRX3P78415 AC123567.1-201ENST00000548294 1261 ntBASIC18.79■□□□□ 0.6
IRX3P78415 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
IRX3P78415 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.79■□□□□ 0.6
IRX3P78415 RAB43P1-201ENST00000561790 589 ntBASIC18.79■□□□□ 0.6
IRX3P78415 MIR6805-201ENST00000615055 62 ntBASIC18.79■□□□□ 0.6
IRX3P78415 PP12613-201ENST00000424958 2230 ntBASIC18.79■□□□□ 0.6
IRX3P78415 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.79■□□□□ 0.6
IRX3P78415 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
IRX3P78415 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
IRX3P78415 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.79■□□□□ 0.6
IRX3P78415 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
IRX3P78415 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
IRX3P78415 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.78■□□□□ 0.6
IRX3P78415 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.78■□□□□ 0.6
IRX3P78415 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.78■□□□□ 0.6
IRX3P78415 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.78■□□□□ 0.6
IRX3P78415 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
IRX3P78415 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 AC079776.1-201ENST00000401540 1152 ntBASIC18.78■□□□□ 0.6
IRX3P78415 MIR1909-201ENST00000411312 80 ntBASIC18.78■□□□□ 0.6
IRX3P78415 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.78■□□□□ 0.6
IRX3P78415 AC112492.5-201ENST00000421897 457 ntBASIC18.78■□□□□ 0.6
IRX3P78415 TTTY23B-201ENST00000442790 549 ntBASIC18.78■□□□□ 0.6
IRX3P78415 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.78■□□□□ 0.6
IRX3P78415 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.78■□□□□ 0.6
IRX3P78415 AL589987.1-201ENST00000453380 819 ntBASIC18.78■□□□□ 0.6
IRX3P78415 RN7SL837P-201ENST00000463010 287 ntBASIC18.78■□□□□ 0.6
IRX3P78415 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.78■□□□□ 0.6
IRX3P78415 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 AC023824.1-201ENST00000562945 2975 ntBASIC18.78■□□□□ 0.6
IRX3P78415 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 AC106886.1-201ENST00000568660 600 ntBASIC18.78■□□□□ 0.6
IRX3P78415 AC099568.2-201ENST00000609194 695 ntBASIC18.78■□□□□ 0.6
IRX3P78415 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.78■□□□□ 0.6
IRX3P78415 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC18.78■□□□□ 0.6
IRX3P78415 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
IRX3P78415 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
IRX3P78415 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
IRX3P78415 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.78■□□□□ 0.6
IRX3P78415 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
IRX3P78415 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX3P78415 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
IRX3P78415 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
IRX3P78415 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
IRX3P78415 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.77■□□□□ 0.6
IRX3P78415 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.77■□□□□ 0.6
IRX3P78415 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
IRX3P78415 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
IRX3P78415 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.77■□□□□ 0.6
IRX3P78415 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.77■□□□□ 0.6
IRX3P78415 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.77■□□□□ 0.6
IRX3P78415 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms