Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAE1P78406 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.28■□□□□ 0.04
RAE1P78406 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.28■□□□□ 0.04
RAE1P78406 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.28■□□□□ 0.04
RAE1P78406 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.28■□□□□ 0.04
RAE1P78406 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.28■□□□□ 0.04
RAE1P78406 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAE1P78406 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.28■□□□□ 0.04
RAE1P78406 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAE1P78406 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.28■□□□□ 0.04
RAE1P78406 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAE1P78406 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAE1P78406 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAE1P78406 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
RAE1P78406 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAE1P78406 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAE1P78406 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.28■□□□□ 0.04
RAE1P78406 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAE1P78406 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.28■□□□□ 0.04
RAE1P78406 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAE1P78406 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.27■□□□□ 0.04
RAE1P78406 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAE1P78406 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAE1P78406 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.27■□□□□ 0.04
RAE1P78406 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RAE1P78406 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAE1P78406 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAE1P78406 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAE1P78406 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
RAE1P78406 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAE1P78406 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAE1P78406 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAE1P78406 AC004987.2-201ENST00000395959 1148 ntBASIC15.27■□□□□ 0.04
RAE1P78406 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.27■□□□□ 0.04
RAE1P78406 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.27■□□□□ 0.04
RAE1P78406 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAE1P78406 CEND1P1-201ENST00000451006 455 ntBASIC15.27■□□□□ 0.04
RAE1P78406 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAE1P78406 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RAE1P78406 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.27■□□□□ 0.04
RAE1P78406 AC005829.1-201ENST00000570002 483 ntBASIC15.27■□□□□ 0.04
RAE1P78406 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.27■□□□□ 0.04
RAE1P78406 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RAE1P78406 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.27■□□□□ 0.04
RAE1P78406 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAE1P78406 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.03
RAE1P78406 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAE1P78406 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.27■□□□□ 0.03
RAE1P78406 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAE1P78406 REXO1L1P-202ENST00000608646 1974 ntBASIC15.27■□□□□ 0.03
RAE1P78406 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAE1P78406 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.27■□□□□ 0.03
RAE1P78406 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.27■□□□□ 0.03
RAE1P78406 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RAE1P78406 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.27■□□□□ 0.03
RAE1P78406 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAE1P78406 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAE1P78406 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RAE1P78406 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
RAE1P78406 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.26■□□□□ 0.03
RAE1P78406 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.26■□□□□ 0.03
RAE1P78406 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
RAE1P78406 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.26■□□□□ 0.03
RAE1P78406 FAM58DP-201ENST00000428076 619 ntBASIC15.26■□□□□ 0.03
RAE1P78406 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.26■□□□□ 0.03
RAE1P78406 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.26■□□□□ 0.03
RAE1P78406 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RAE1P78406 YBX1P5-201ENST00000509441 847 ntBASIC15.26■□□□□ 0.03
RAE1P78406 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.26■□□□□ 0.03
RAE1P78406 MIR4313-201ENST00000580760 101 ntBASIC15.26■□□□□ 0.03
RAE1P78406 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.26■□□□□ 0.03
RAE1P78406 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 CYP4F24P-201ENST00000586049 1580 ntBASIC15.26■□□□□ 0.03
RAE1P78406 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
RAE1P78406 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 AC144831.1-201ENST00000573312 2656 ntBASIC15.26■□□□□ 0.03
RAE1P78406 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.26■□□□□ 0.03
RAE1P78406 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.26■□□□□ 0.03
RAE1P78406 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAE1P78406 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAE1P78406 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAE1P78406 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms