Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SEC61A1P61619 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SEC61A1P61619 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SEC61A1P61619 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.22□□□□□ -0.13
SEC61A1P61619 ME2P1-201ENST00000426028 1970 ntBASIC14.22□□□□□ -0.13
SEC61A1P61619 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.22□□□□□ -0.13
SEC61A1P61619 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SEC61A1P61619 AL645728.1-201ENST00000366221 2101 ntBASIC14.21□□□□□ -0.13
SEC61A1P61619 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SEC61A1P61619 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SEC61A1P61619 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.21□□□□□ -0.13
SEC61A1P61619 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.21□□□□□ -0.13
SEC61A1P61619 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SEC61A1P61619 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SEC61A1P61619 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.21□□□□□ -0.13
SEC61A1P61619 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SEC61A1P61619 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.21□□□□□ -0.13
SEC61A1P61619 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 GPX1P2-201ENST00000429271 606 ntBASIC14.21□□□□□ -0.13
SEC61A1P61619 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.21□□□□□ -0.13
SEC61A1P61619 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.21□□□□□ -0.13
SEC61A1P61619 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.21□□□□□ -0.13
SEC61A1P61619 PAWRP1-201ENST00000451083 565 ntBASIC14.21□□□□□ -0.13
SEC61A1P61619 AC087163.2-201ENST00000457299 853 ntBASIC14.21□□□□□ -0.13
SEC61A1P61619 HLA-J-202ENST00000469281 1241 ntBASIC14.21□□□□□ -0.13
SEC61A1P61619 SLC25A6P2-201ENST00000497974 877 ntBASIC14.21□□□□□ -0.13
SEC61A1P61619 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.21□□□□□ -0.13
SEC61A1P61619 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.21□□□□□ -0.13
SEC61A1P61619 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.21□□□□□ -0.13
SEC61A1P61619 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.21□□□□□ -0.13
SEC61A1P61619 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SEC61A1P61619 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61A1P61619 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.21□□□□□ -0.13
SEC61A1P61619 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SEC61A1P61619 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
SEC61A1P61619 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SEC61A1P61619 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.2□□□□□ -0.14
SEC61A1P61619 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SEC61A1P61619 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.2□□□□□ -0.14
SEC61A1P61619 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SEC61A1P61619 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.2□□□□□ -0.14
SEC61A1P61619 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SEC61A1P61619 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 AC004832.2-201ENST00000426397 482 ntBASIC14.2□□□□□ -0.14
SEC61A1P61619 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.2□□□□□ -0.14
SEC61A1P61619 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.2□□□□□ -0.14
SEC61A1P61619 AC055717.3-201ENST00000622967 595 ntBASIC14.2□□□□□ -0.14
SEC61A1P61619 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SEC61A1P61619 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.2□□□□□ -0.14
SEC61A1P61619 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.2□□□□□ -0.14
SEC61A1P61619 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.2□□□□□ -0.14
SEC61A1P61619 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SEC61A1P61619 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 AL161772.1-201ENST00000610494 4412 ntBASIC14.2□□□□□ -0.14
SEC61A1P61619 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SEC61A1P61619 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61A1P61619 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SEC61A1P61619 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms