Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
ATP1B3P54709 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ATP1B3P54709 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
ATP1B3P54709 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.07□□□□□ -0.16
ATP1B3P54709 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 AL450487.1-201ENST00000426799 995 ntBASIC14.07□□□□□ -0.16
ATP1B3P54709 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.07□□□□□ -0.16
ATP1B3P54709 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ATP1B3P54709 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.07□□□□□ -0.16
ATP1B3P54709 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.07□□□□□ -0.16
ATP1B3P54709 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
ATP1B3P54709 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.07□□□□□ -0.16
ATP1B3P54709 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.07□□□□□ -0.16
ATP1B3P54709 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ATP1B3P54709 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
ATP1B3P54709 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.07□□□□□ -0.16
ATP1B3P54709 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.07□□□□□ -0.16
ATP1B3P54709 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.07□□□□□ -0.16
ATP1B3P54709 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ATP1B3P54709 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.07□□□□□ -0.16
ATP1B3P54709 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ATP1B3P54709 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATP1B3P54709 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.07□□□□□ -0.16
ATP1B3P54709 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.06□□□□□ -0.16
ATP1B3P54709 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.06□□□□□ -0.16
ATP1B3P54709 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.06□□□□□ -0.16
ATP1B3P54709 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.06□□□□□ -0.16
ATP1B3P54709 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.06□□□□□ -0.16
ATP1B3P54709 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ATP1B3P54709 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.06□□□□□ -0.16
ATP1B3P54709 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
ATP1B3P54709 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.06□□□□□ -0.16
ATP1B3P54709 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 AP002469.2-201ENST00000531724 424 ntBASIC14.06□□□□□ -0.16
ATP1B3P54709 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.06□□□□□ -0.16
ATP1B3P54709 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ATP1B3P54709 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ATP1B3P54709 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.06□□□□□ -0.16
ATP1B3P54709 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.06□□□□□ -0.16
ATP1B3P54709 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.06□□□□□ -0.16
ATP1B3P54709 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.06□□□□□ -0.16
ATP1B3P54709 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATP1B3P54709 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
ATP1B3P54709 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.05□□□□□ -0.16
ATP1B3P54709 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.05□□□□□ -0.16
ATP1B3P54709 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms