Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.56■□□□□ 0.24
ATXN3P54252 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 SLC25A1P3-201ENST00000395415 828 ntBASIC16.56■□□□□ 0.24
ATXN3P54252 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.56■□□□□ 0.24
ATXN3P54252 HCG4-201ENST00000418983 998 ntBASIC16.56■□□□□ 0.24
ATXN3P54252 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.56■□□□□ 0.24
ATXN3P54252 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.56■□□□□ 0.24
ATXN3P54252 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.56■□□□□ 0.24
ATXN3P54252 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.56■□□□□ 0.24
ATXN3P54252 MIR6752-201ENST00000618442 71 ntBASIC16.56■□□□□ 0.24
ATXN3P54252 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.56■□□□□ 0.24
ATXN3P54252 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ATXN3P54252 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.56■□□□□ 0.24
ATXN3P54252 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.56■□□□□ 0.24
ATXN3P54252 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.56■□□□□ 0.24
ATXN3P54252 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATXN3P54252 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
ATXN3P54252 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.55■□□□□ 0.24
ATXN3P54252 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ATXN3P54252 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.55■□□□□ 0.24
ATXN3P54252 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.55■□□□□ 0.24
ATXN3P54252 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.55■□□□□ 0.24
ATXN3P54252 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ATXN3P54252 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.55■□□□□ 0.24
ATXN3P54252 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ATXN3P54252 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.55■□□□□ 0.24
ATXN3P54252 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.55■□□□□ 0.24
ATXN3P54252 NME2P1-201ENST00000426182 414 ntBASIC16.55■□□□□ 0.24
ATXN3P54252 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.55■□□□□ 0.24
ATXN3P54252 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.55■□□□□ 0.24
ATXN3P54252 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.55■□□□□ 0.24
ATXN3P54252 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.55■□□□□ 0.24
ATXN3P54252 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.55■□□□□ 0.24
ATXN3P54252 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.55■□□□□ 0.24
ATXN3P54252 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.55■□□□□ 0.24
ATXN3P54252 AL596325.1-201ENST00000563991 1082 ntBASIC16.55■□□□□ 0.24
ATXN3P54252 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ATXN3P54252 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.55■□□□□ 0.24
ATXN3P54252 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
ATXN3P54252 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ATXN3P54252 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.55■□□□□ 0.24
ATXN3P54252 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.55■□□□□ 0.24
ATXN3P54252 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ATXN3P54252 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATXN3P54252 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.55■□□□□ 0.24
ATXN3P54252 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
ATXN3P54252 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ATXN3P54252 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
ATXN3P54252 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.54■□□□□ 0.24
ATXN3P54252 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 AC092580.3-201ENST00000430932 139 ntBASIC16.54■□□□□ 0.24
ATXN3P54252 AC004890.2-204ENST00000481968 304 ntBASIC16.54■□□□□ 0.24
ATXN3P54252 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ATXN3P54252 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms