Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LBX1P52954 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LBX1P52954 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.82■□□□□ 0.44
LBX1P52954 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LBX1P52954 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LBX1P52954 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.82■□□□□ 0.44
LBX1P52954 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LBX1P52954 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LBX1P52954 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
LBX1P52954 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.82■□□□□ 0.44
LBX1P52954 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.82■□□□□ 0.44
LBX1P52954 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.82■□□□□ 0.44
LBX1P52954 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC17.82■□□□□ 0.44
LBX1P52954 AC100850.1-201ENST00000506768 649 ntBASIC17.82■□□□□ 0.44
LBX1P52954 MARK2P5-201ENST00000507649 634 ntBASIC17.82■□□□□ 0.44
LBX1P52954 MIR4754-201ENST00000582477 89 ntBASIC17.82■□□□□ 0.44
LBX1P52954 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.82■□□□□ 0.44
LBX1P52954 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LBX1P52954 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.82■□□□□ 0.44
LBX1P52954 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LBX1P52954 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LBX1P52954 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LBX1P52954 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LBX1P52954 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LBX1P52954 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.82■□□□□ 0.44
LBX1P52954 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LBX1P52954 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LBX1P52954 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LBX1P52954 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
LBX1P52954 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.81■□□□□ 0.44
LBX1P52954 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
LBX1P52954 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LBX1P52954 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LBX1P52954 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LBX1P52954 ACTBP8-201ENST00000403258 1108 ntBASIC17.81■□□□□ 0.44
LBX1P52954 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.81■□□□□ 0.44
LBX1P52954 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.81■□□□□ 0.44
LBX1P52954 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.81■□□□□ 0.44
LBX1P52954 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.81■□□□□ 0.44
LBX1P52954 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.81■□□□□ 0.44
LBX1P52954 AC243562.2-201ENST00000561247 970 ntBASIC17.81■□□□□ 0.44
LBX1P52954 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.81■□□□□ 0.44
LBX1P52954 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.81■□□□□ 0.44
LBX1P52954 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.81■□□□□ 0.44
LBX1P52954 BX539320.1-201ENST00000623759 877 ntBASIC17.81■□□□□ 0.44
LBX1P52954 MME-218ENST00000625667 363 ntTSL 5 BASIC17.81■□□□□ 0.44
LBX1P52954 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.81■□□□□ 0.44
LBX1P52954 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.81■□□□□ 0.44
LBX1P52954 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.81■□□□□ 0.44
LBX1P52954 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
LBX1P52954 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
LBX1P52954 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.81■□□□□ 0.44
LBX1P52954 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.81■□□□□ 0.44
LBX1P52954 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.81■□□□□ 0.44
LBX1P52954 KRT8P4-201ENST00000509735 1454 ntBASIC17.81■□□□□ 0.44
LBX1P52954 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LBX1P52954 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LBX1P52954 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LBX1P52954 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.81■□□□□ 0.44
LBX1P52954 AC005622.1-201ENST00000636801 1703 ntBASIC17.81■□□□□ 0.44
LBX1P52954 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LBX1P52954 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LBX1P52954 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.8■□□□□ 0.44
LBX1P52954 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LBX1P52954 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LBX1P52954 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.8■□□□□ 0.44
LBX1P52954 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LBX1P52954 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.8■□□□□ 0.44
LBX1P52954 AL357373.1-201ENST00000394974 322 ntBASIC17.8■□□□□ 0.44
LBX1P52954 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.8■□□□□ 0.44
LBX1P52954 HIST2H2BB-201ENST00000449108 381 ntBASIC17.8■□□□□ 0.44
LBX1P52954 AC073150.1-201ENST00000450406 1084 ntBASIC17.8■□□□□ 0.44
LBX1P52954 AC090857.1-201ENST00000527400 390 ntBASIC17.8■□□□□ 0.44
LBX1P52954 AC138894.2-201ENST00000602838 371 ntBASIC17.8■□□□□ 0.44
LBX1P52954 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LBX1P52954 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LBX1P52954 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LBX1P52954 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LBX1P52954 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LBX1P52954 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LBX1P52954 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.8■□□□□ 0.44
LBX1P52954 BCL2-203ENST00000589955 5011 ntBASIC17.8■□□□□ 0.44
LBX1P52954 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LBX1P52954 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.8■□□□□ 0.44
LBX1P52954 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 466.4 ms