Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RNF144AP50876 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
RNF144AP50876 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.06■□□□□ 0
RNF144AP50876 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.06■□□□□ 0
RNF144AP50876 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RNF144AP50876 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RNF144AP50876 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.06■□□□□ 0
RNF144AP50876 YBX2P1-201ENST00000394192 760 ntBASIC15.06■□□□□ 0
RNF144AP50876 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 AL355306.1-201ENST00000415580 579 ntBASIC15.06■□□□□ 0
RNF144AP50876 AL671277.1-201ENST00000429656 993 ntBASIC15.06■□□□□ 0
RNF144AP50876 TIMM8BP1-201ENST00000452384 211 ntBASIC15.06■□□□□ 0
RNF144AP50876 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RNF144AP50876 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.06■□□□□ 0
RNF144AP50876 AL135744.1-201ENST00000565098 629 ntBASIC15.06■□□□□ 0
RNF144AP50876 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.06■□□□□ 0
RNF144AP50876 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.06■□□□□ 0
RNF144AP50876 AC010327.4-202ENST00000591484 748 ntBASIC15.06■□□□□ 0
RNF144AP50876 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.06■□□□□ 0
RNF144AP50876 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.06■□□□□ 0
RNF144AP50876 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.06■□□□□ 0
RNF144AP50876 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RNF144AP50876 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RNF144AP50876 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.06■□□□□ 0
RNF144AP50876 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
RNF144AP50876 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.06■□□□□ 0
RNF144AP50876 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
RNF144AP50876 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF144AP50876 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RNF144AP50876 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.05■□□□□ 0
RNF144AP50876 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
RNF144AP50876 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
RNF144AP50876 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.05■□□□□ 0
RNF144AP50876 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.05■□□□□ 0
RNF144AP50876 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
RNF144AP50876 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RNF144AP50876 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF144AP50876 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF144AP50876 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
RNF144AP50876 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF144AP50876 AC093724.1-201ENST00000448659 1027 ntBASIC15.05■□□□□ -0
RNF144AP50876 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.05■□□□□ -0
RNF144AP50876 PRYP6-201ENST00000514804 343 ntBASIC15.05■□□□□ -0
RNF144AP50876 KRT8P48-201ENST00000515599 1220 ntBASIC15.05■□□□□ -0
RNF144AP50876 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.05■□□□□ -0
RNF144AP50876 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.05■□□□□ -0
RNF144AP50876 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.05■□□□□ -0
RNF144AP50876 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.05■□□□□ -0
RNF144AP50876 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
RNF144AP50876 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF144AP50876 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.05■□□□□ -0
RNF144AP50876 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.05■□□□□ -0
RNF144AP50876 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
RNF144AP50876 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF144AP50876 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
RNF144AP50876 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RNF144AP50876 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RNF144AP50876 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.05■□□□□ -0
RNF144AP50876 AC063926.3-201ENST00000624734 5658 ntBASIC15.05■□□□□ -0
RNF144AP50876 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ -0
RNF144AP50876 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
RNF144AP50876 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
RNF144AP50876 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF144AP50876 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
RNF144AP50876 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.05■□□□□ -0
RNF144AP50876 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RNF144AP50876 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF144AP50876 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RNF144AP50876 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RNF144AP50876 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RNF144AP50876 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms