Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AC241585.1-201ENST00000433527 519 ntBASIC17.02■□□□□ 0.32
TUBP50607 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TUBP50607 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBP50607 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TUBP50607 BANF1P1-201ENST00000553684 263 ntBASIC17.02■□□□□ 0.32
TUBP50607 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TUBP50607 AC105021.1-202ENST00000570572 669 ntBASIC17.02■□□□□ 0.32
TUBP50607 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.02■□□□□ 0.32
TUBP50607 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.02■□□□□ 0.32
TUBP50607 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBP50607 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.02■□□□□ 0.32
TUBP50607 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.02■□□□□ 0.32
TUBP50607 SPDYE12P-201ENST00000618416 771 ntBASIC17.02■□□□□ 0.32
TUBP50607 AL390754.1-201ENST00000619088 582 ntBASIC17.02■□□□□ 0.32
TUBP50607 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBP50607 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBP50607 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TUBP50607 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TUBP50607 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TUBP50607 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.02■□□□□ 0.31
TUBP50607 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TUBP50607 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TUBP50607 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TUBP50607 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBP50607 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBP50607 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBP50607 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.01■□□□□ 0.31
TUBP50607 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBP50607 POU5F1P6-201ENST00000466990 990 ntBASIC17.01■□□□□ 0.31
TUBP50607 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBP50607 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBP50607 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBP50607 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.01■□□□□ 0.31
TUBP50607 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TUBP50607 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
TUBP50607 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.01■□□□□ 0.31
TUBP50607 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 U82695.1-201ENST00000635752 1889 ntBASIC17.01■□□□□ 0.31
TUBP50607 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
TUBP50607 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TUBP50607 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBP50607 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 ME2P1-201ENST00000426028 1970 ntBASIC17■□□□□ 0.31
TUBP50607 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17■□□□□ 0.31
TUBP50607 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17■□□□□ 0.31
TUBP50607 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TUBP50607 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17■□□□□ 0.31
TUBP50607 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17■□□□□ 0.31
TUBP50607 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TUBP50607 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TUBP50607 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17■□□□□ 0.31
TUBP50607 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TUBP50607 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17■□□□□ 0.31
TUBP50607 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17■□□□□ 0.31
TUBP50607 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17■□□□□ 0.31
TUBP50607 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17■□□□□ 0.31
TUBP50607 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17■□□□□ 0.31
TUBP50607 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBP50607 AL365330.1-201ENST00000607459 531 ntBASIC17■□□□□ 0.31
TUBP50607 RN7SL828P-201ENST00000607615 303 ntBASIC17■□□□□ 0.31
TUBP50607 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
TUBP50607 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
TUBP50607 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17■□□□□ 0.31
TUBP50607 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms