Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX2P50458 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
LHX2P50458 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX2P50458 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LHX2P50458 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.35□□□□□ -0.11
LHX2P50458 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX2P50458 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LHX2P50458 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.34□□□□□ -0.11
LHX2P50458 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.34□□□□□ -0.11
LHX2P50458 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.34□□□□□ -0.11
LHX2P50458 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.34□□□□□ -0.11
LHX2P50458 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LHX2P50458 PIN1P1-201ENST00000412108 996 ntBASIC14.34□□□□□ -0.11
LHX2P50458 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.34□□□□□ -0.11
LHX2P50458 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.34□□□□□ -0.11
LHX2P50458 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 AC004790.1-201ENST00000612686 536 ntBASIC14.34□□□□□ -0.11
LHX2P50458 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
LHX2P50458 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.34□□□□□ -0.11
LHX2P50458 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
LHX2P50458 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.34□□□□□ -0.11
LHX2P50458 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
LHX2P50458 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.34□□□□□ -0.11
LHX2P50458 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.34□□□□□ -0.11
LHX2P50458 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX2P50458 PCDH8P1-201ENST00000428983 2773 ntBASIC14.34□□□□□ -0.11
LHX2P50458 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.33□□□□□ -0.11
LHX2P50458 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LHX2P50458 Z97205.2-201ENST00000564697 1639 ntBASIC14.33□□□□□ -0.11
LHX2P50458 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.33□□□□□ -0.11
LHX2P50458 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LHX2P50458 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.33□□□□□ -0.11
LHX2P50458 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.33□□□□□ -0.11
LHX2P50458 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LHX2P50458 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
LHX2P50458 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LHX2P50458 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.33□□□□□ -0.11
LHX2P50458 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.33□□□□□ -0.11
LHX2P50458 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
LHX2P50458 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
LHX2P50458 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LHX2P50458 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
LHX2P50458 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.33□□□□□ -0.11
LHX2P50458 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 REXO1L1P-202ENST00000608646 1974 ntBASIC14.33□□□□□ -0.12
LHX2P50458 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.33□□□□□ -0.12
LHX2P50458 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.33□□□□□ -0.12
LHX2P50458 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.33□□□□□ -0.12
LHX2P50458 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.33□□□□□ -0.12
LHX2P50458 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.33□□□□□ -0.12
LHX2P50458 CRB3P1-201ENST00000449338 276 ntBASIC14.33□□□□□ -0.12
LHX2P50458 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.33□□□□□ -0.12
LHX2P50458 DOC2GP-202ENST00000514950 1163 ntBASIC14.33□□□□□ -0.12
LHX2P50458 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 AC190387.1-201ENST00000551683 408 ntBASIC14.33□□□□□ -0.12
LHX2P50458 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.33□□□□□ -0.12
LHX2P50458 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.33□□□□□ -0.12
LHX2P50458 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.33□□□□□ -0.12
LHX2P50458 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.33□□□□□ -0.12
LHX2P50458 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
LHX2P50458 SRD5A3P1-201ENST00000603021 949 ntBASIC14.33□□□□□ -0.12
LHX2P50458 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.33□□□□□ -0.12
LHX2P50458 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.33□□□□□ -0.12
LHX2P50458 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LHX2P50458 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms