Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.85■□□□□ 0.45
CENPFP49454 AC114501.1-201ENST00000445949 172 ntBASIC17.85■□□□□ 0.45
CENPFP49454 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.85■□□□□ 0.45
CENPFP49454 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.85■□□□□ 0.45
CENPFP49454 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CENPFP49454 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.85■□□□□ 0.45
CENPFP49454 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.85■□□□□ 0.45
CENPFP49454 FO393414.2-201ENST00000405153 598 ntBASIC17.85■□□□□ 0.45
CENPFP49454 BAATP1-201ENST00000412284 1225 ntBASIC17.85■□□□□ 0.45
CENPFP49454 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 AC078819.1-201ENST00000547454 765 ntBASIC17.85■□□□□ 0.45
CENPFP49454 AC012085.1-201ENST00000548270 765 ntBASIC17.85■□□□□ 0.45
CENPFP49454 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CENPFP49454 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CENPFP49454 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.85■□□□□ 0.45
CENPFP49454 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CENPFP49454 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CENPFP49454 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.85■□□□□ 0.45
CENPFP49454 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.85■□□□□ 0.45
CENPFP49454 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.85■□□□□ 0.45
CENPFP49454 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.85■□□□□ 0.45
CENPFP49454 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CENPFP49454 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPFP49454 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CENPFP49454 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CENPFP49454 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CENPFP49454 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CENPFP49454 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.84■□□□□ 0.45
CENPFP49454 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPFP49454 AC015818.8-201ENST00000587907 1519 ntBASIC17.84■□□□□ 0.45
CENPFP49454 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.84■□□□□ 0.45
CENPFP49454 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPFP49454 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPFP49454 AL133499.1-201ENST00000596207 608 ntBASIC17.84■□□□□ 0.45
CENPFP49454 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPFP49454 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPFP49454 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CENPFP49454 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CENPFP49454 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPFP49454 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.84■□□□□ 0.45
CENPFP49454 FAM197Y7-201ENST00000432892 766 ntBASIC17.84■□□□□ 0.45
CENPFP49454 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.84■□□□□ 0.45
CENPFP49454 VDAC1P7-201ENST00000462417 847 ntBASIC17.84■□□□□ 0.45
CENPFP49454 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.84■□□□□ 0.45
CENPFP49454 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CENPFP49454 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPFP49454 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CENPFP49454 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CENPFP49454 AC006480.2-201ENST00000609770 1337 ntBASIC17.83■□□□□ 0.45
CENPFP49454 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.83■□□□□ 0.45
CENPFP49454 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CENPFP49454 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.83■□□□□ 0.45
CENPFP49454 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CENPFP49454 AL138709.1-201ENST00000614840 1693 ntBASIC17.83■□□□□ 0.45
CENPFP49454 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CENPFP49454 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CENPFP49454 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CENPFP49454 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.83■□□□□ 0.45
CENPFP49454 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.83■□□□□ 0.45
CENPFP49454 DRD5P1-201ENST00000456605 1438 ntBASIC17.83■□□□□ 0.45
CENPFP49454 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CENPFP49454 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.83■□□□□ 0.44
CENPFP49454 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CENPFP49454 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CENPFP49454 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CENPFP49454 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.83■□□□□ 0.44
CENPFP49454 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.83■□□□□ 0.44
CENPFP49454 KRT18P64-201ENST00000434946 1219 ntBASIC17.83■□□□□ 0.44
CENPFP49454 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.83■□□□□ 0.44
CENPFP49454 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.83■□□□□ 0.44
CENPFP49454 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.83■□□□□ 0.44
CENPFP49454 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CENPFP49454 LETM1P2-201ENST00000597330 2178 ntBASIC17.83■□□□□ 0.44
CENPFP49454 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CENPFP49454 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.83■□□□□ 0.44
CENPFP49454 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CENPFP49454 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CENPFP49454 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
CENPFP49454 RPL13AP19-201ENST00000434320 584 ntBASIC17.83■□□□□ 0.44
CENPFP49454 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CENPFP49454 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CENPFP49454 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.83■□□□□ 0.44
CENPFP49454 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms