Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 FAM45BP-202ENST00000592932 1624 ntBASIC14.88□□□□□ -0.03
SLC9A3P48764 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC9A3P48764 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC9A3P48764 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SLC9A3P48764 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC9A3P48764 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SLC9A3P48764 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC9A3P48764 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC9A3P48764 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SLC9A3P48764 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC9A3P48764 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC9A3P48764 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC9A3P48764 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC9A3P48764 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.87□□□□□ -0.03
SLC9A3P48764 AC092910.1-201ENST00000482027 1129 ntBASIC14.87□□□□□ -0.03
SLC9A3P48764 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.87□□□□□ -0.03
SLC9A3P48764 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
SLC9A3P48764 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SLC9A3P48764 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC9A3P48764 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC9A3P48764 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC9A3P48764 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC9A3P48764 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC9A3P48764 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC9A3P48764 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC9A3P48764 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC9A3P48764 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SLC9A3P48764 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SLC9A3P48764 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC9A3P48764 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC9A3P48764 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SLC9A3P48764 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC9A3P48764 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC9A3P48764 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SLC9A3P48764 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
SLC9A3P48764 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC9A3P48764 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC9A3P48764 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 AC079781.3-201ENST00000449110 356 ntBASIC14.86□□□□□ -0.03
SLC9A3P48764 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC9A3P48764 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.86□□□□□ -0.03
SLC9A3P48764 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SLC9A3P48764 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.86□□□□□ -0.03
SLC9A3P48764 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SLC9A3P48764 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC9A3P48764 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 AP002414.2-201ENST00000591780 3365 ntBASIC14.86□□□□□ -0.03
SLC9A3P48764 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SLC9A3P48764 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
SLC9A3P48764 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC9A3P48764 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms