Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SOX2P48431 SBF1P1-201ENST00000444527 5631 ntBASIC14.28□□□□□ -0.12
SOX2P48431 CICP13-201ENST00000422015 2789 ntBASIC14.28□□□□□ -0.12
SOX2P48431 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.28□□□□□ -0.12
SOX2P48431 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SOX2P48431 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SOX2P48431 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SOX2P48431 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.27□□□□□ -0.12
SOX2P48431 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.27□□□□□ -0.12
SOX2P48431 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SOX2P48431 U82695.1-201ENST00000635752 1889 ntBASIC14.27□□□□□ -0.12
SOX2P48431 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SOX2P48431 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SOX2P48431 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SOX2P48431 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.27□□□□□ -0.12
SOX2P48431 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.27□□□□□ -0.12
SOX2P48431 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SOX2P48431 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SOX2P48431 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
SOX2P48431 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SOX2P48431 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SOX2P48431 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.27□□□□□ -0.12
SOX2P48431 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SOX2P48431 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
SOX2P48431 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SOX2P48431 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SOX2P48431 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.27□□□□□ -0.13
SOX2P48431 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.27□□□□□ -0.13
SOX2P48431 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.27□□□□□ -0.13
SOX2P48431 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.27□□□□□ -0.13
SOX2P48431 MIR3652-201ENST00000579335 131 ntBASIC14.27□□□□□ -0.13
SOX2P48431 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SOX2P48431 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SOX2P48431 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.27□□□□□ -0.13
SOX2P48431 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SOX2P48431 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.27□□□□□ -0.13
SOX2P48431 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SOX2P48431 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SOX2P48431 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SOX2P48431 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SOX2P48431 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SOX2P48431 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SOX2P48431 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SOX2P48431 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SOX2P48431 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SOX2P48431 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SOX2P48431 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.26□□□□□ -0.13
SOX2P48431 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SOX2P48431 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SOX2P48431 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.26□□□□□ -0.13
SOX2P48431 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SOX2P48431 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.26□□□□□ -0.13
SOX2P48431 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SOX2P48431 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.26□□□□□ -0.13
SOX2P48431 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.26□□□□□ -0.13
SOX2P48431 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.26□□□□□ -0.13
SOX2P48431 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.26□□□□□ -0.13
SOX2P48431 DUSP5P1-201ENST00000441325 1139 ntBASIC14.26□□□□□ -0.13
SOX2P48431 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.26□□□□□ -0.13
SOX2P48431 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 AC091304.2-201ENST00000564639 760 ntBASIC14.26□□□□□ -0.13
SOX2P48431 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.26□□□□□ -0.13
SOX2P48431 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.26□□□□□ -0.13
SOX2P48431 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.26□□□□□ -0.13
SOX2P48431 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.26□□□□□ -0.13
SOX2P48431 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.26□□□□□ -0.13
SOX2P48431 AC107918.4-202ENST00000641623 219 ntBASIC14.26□□□□□ -0.13
SOX2P48431 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SOX2P48431 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.26□□□□□ -0.13
SOX2P48431 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SOX2P48431 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.25□□□□□ -0.13
SOX2P48431 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.25□□□□□ -0.13
SOX2P48431 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SOX2P48431 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
SOX2P48431 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SOX2P48431 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SOX2P48431 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SOX2P48431 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SOX2P48431 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.25□□□□□ -0.13
SOX2P48431 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SOX2P48431 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SOX2P48431 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.25□□□□□ -0.13
SOX2P48431 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SOX2P48431 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.25□□□□□ -0.13
SOX2P48431 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms