Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
KRT9P35527 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
KRT9P35527 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT9P35527 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT9P35527 AC007967.2-201ENST00000432613 625 ntBASIC17.7■□□□□ 0.42
KRT9P35527 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.7■□□□□ 0.42
KRT9P35527 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT9P35527 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
KRT9P35527 AC120114.3-201ENST00000611923 658 ntBASIC17.7■□□□□ 0.42
KRT9P35527 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
KRT9P35527 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT9P35527 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT9P35527 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT9P35527 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT9P35527 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
KRT9P35527 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.69■□□□□ 0.42
KRT9P35527 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT9P35527 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT9P35527 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT9P35527 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.69■□□□□ 0.42
KRT9P35527 TNRC18P2-201ENST00000417666 2714 ntBASIC17.69■□□□□ 0.42
KRT9P35527 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT9P35527 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.69■□□□□ 0.42
KRT9P35527 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT9P35527 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.69■□□□□ 0.42
KRT9P35527 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT9P35527 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
KRT9P35527 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.69■□□□□ 0.42
KRT9P35527 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.69■□□□□ 0.42
KRT9P35527 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT9P35527 AL031055.1-201ENST00000606362 631 ntBASIC17.69■□□□□ 0.42
KRT9P35527 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.69■□□□□ 0.42
KRT9P35527 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
KRT9P35527 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT9P35527 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT9P35527 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT9P35527 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT9P35527 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT9P35527 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT9P35527 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT9P35527 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT9P35527 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT9P35527 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
KRT9P35527 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT9P35527 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT9P35527 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
KRT9P35527 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.68■□□□□ 0.42
KRT9P35527 PMS2P4-201ENST00000412466 1052 ntBASIC17.68■□□□□ 0.42
KRT9P35527 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT9P35527 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
KRT9P35527 PKD1P5-201ENST00000532415 10291 ntBASIC17.68■□□□□ 0.42
KRT9P35527 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.68■□□□□ 0.42
KRT9P35527 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
KRT9P35527 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
KRT9P35527 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.68■□□□□ 0.42
KRT9P35527 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 AC020658.6-201ENST00000623564 1870 ntBASIC17.68■□□□□ 0.42
KRT9P35527 AC004877.2-201ENST00000623941 599 ntBASIC17.68■□□□□ 0.42
KRT9P35527 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT9P35527 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT9P35527 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
KRT9P35527 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
KRT9P35527 BCAR1-209ENST00000546196 1340 ntBASIC17.68■□□□□ 0.42
KRT9P35527 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT9P35527 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT9P35527 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT9P35527 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
KRT9P35527 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT9P35527 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT9P35527 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT9P35527 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms