Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HTR1EP28566 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.51■□□□□ 0.07
HTR1EP28566 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
HTR1EP28566 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HTR1EP28566 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HTR1EP28566 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.51■□□□□ 0.07
HTR1EP28566 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HTR1EP28566 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HTR1EP28566 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HTR1EP28566 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HTR1EP28566 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HTR1EP28566 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HTR1EP28566 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HTR1EP28566 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
HTR1EP28566 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTR1EP28566 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HTR1EP28566 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HTR1EP28566 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTR1EP28566 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HTR1EP28566 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HTR1EP28566 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.5■□□□□ 0.07
HTR1EP28566 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HTR1EP28566 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTR1EP28566 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTR1EP28566 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HTR1EP28566 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.5■□□□□ 0.07
HTR1EP28566 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTR1EP28566 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.5■□□□□ 0.07
HTR1EP28566 AC108073.2-201ENST00000464002 357 ntBASIC15.5■□□□□ 0.07
HTR1EP28566 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HTR1EP28566 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.5■□□□□ 0.07
HTR1EP28566 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.5■□□□□ 0.07
HTR1EP28566 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.5■□□□□ 0.07
HTR1EP28566 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.5■□□□□ 0.07
HTR1EP28566 AC005622.1-201ENST00000636801 1703 ntBASIC15.5■□□□□ 0.07
HTR1EP28566 TMBIM7P-203ENST00000641617 1718 ntBASIC15.5■□□□□ 0.07
HTR1EP28566 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.5■□□□□ 0.07
HTR1EP28566 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.5■□□□□ 0.07
HTR1EP28566 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.5■□□□□ 0.07
HTR1EP28566 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.5■□□□□ 0.07
HTR1EP28566 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HTR1EP28566 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
HTR1EP28566 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTR1EP28566 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.5■□□□□ 0.07
HTR1EP28566 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HTR1EP28566 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.5■□□□□ 0.07
HTR1EP28566 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HTR1EP28566 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.5■□□□□ 0.07
HTR1EP28566 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HTR1EP28566 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HTR1EP28566 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HTR1EP28566 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.49■□□□□ 0.07
HTR1EP28566 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HTR1EP28566 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR1EP28566 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HTR1EP28566 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 AC006486.2-201ENST00000624246 2199 ntBASIC15.49■□□□□ 0.07
HTR1EP28566 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HTR1EP28566 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR1EP28566 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR1EP28566 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.49■□□□□ 0.07
HTR1EP28566 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.49■□□□□ 0.07
HTR1EP28566 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR1EP28566 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR1EP28566 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.49■□□□□ 0.07
HTR1EP28566 HCG4B-203ENST00000450128 991 ntBASIC15.49■□□□□ 0.07
HTR1EP28566 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HTR1EP28566 SLC25A6P2-201ENST00000497974 877 ntBASIC15.49■□□□□ 0.07
HTR1EP28566 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.49■□□□□ 0.07
HTR1EP28566 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR1EP28566 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.49■□□□□ 0.07
HTR1EP28566 AC004706.3-202ENST00000621574 984 ntBASIC15.49■□□□□ 0.07
HTR1EP28566 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.49■□□□□ 0.07
HTR1EP28566 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR1EP28566 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.49■□□□□ 0.07
HTR1EP28566 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HTR1EP28566 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR1EP28566 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HTR1EP28566 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.49■□□□□ 0.07
HTR1EP28566 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR1EP28566 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 AC008677.1-201ENST00000519230 1561 ntBASIC15.49■□□□□ 0.07
HTR1EP28566 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTR1EP28566 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms