Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.61□□□□□ -0.07
GDF1P27539 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.61□□□□□ -0.07
GDF1P27539 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.61□□□□□ -0.07
GDF1P27539 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.61□□□□□ -0.07
GDF1P27539 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.61□□□□□ -0.07
GDF1P27539 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.61□□□□□ -0.07
GDF1P27539 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 AC243562.2-201ENST00000561247 970 ntBASIC14.61□□□□□ -0.07
GDF1P27539 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.61□□□□□ -0.07
GDF1P27539 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 AL844908.2-201ENST00000609461 460 ntBASIC14.61□□□□□ -0.07
GDF1P27539 MIR6069-201ENST00000620069 79 ntBASIC14.61□□□□□ -0.07
GDF1P27539 AC008761.3-201ENST00000624803 892 ntBASIC14.61□□□□□ -0.07
GDF1P27539 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.61□□□□□ -0.07
GDF1P27539 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
GDF1P27539 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
GDF1P27539 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
GDF1P27539 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.61□□□□□ -0.07
GDF1P27539 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 AC006449.6-201ENST00000612330 2296 ntBASIC14.61□□□□□ -0.07
GDF1P27539 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.6□□□□□ -0.07
GDF1P27539 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.6□□□□□ -0.07
GDF1P27539 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 AC009053.2-201ENST00000563701 2365 ntBASIC14.6□□□□□ -0.07
GDF1P27539 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
GDF1P27539 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GDF1P27539 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.6□□□□□ -0.07
GDF1P27539 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.6□□□□□ -0.07
GDF1P27539 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
GDF1P27539 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.6□□□□□ -0.07
GDF1P27539 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 MRPS18AP1-201ENST00000414458 589 ntBASIC14.6□□□□□ -0.07
GDF1P27539 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.6□□□□□ -0.07
GDF1P27539 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.6□□□□□ -0.07
GDF1P27539 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.6□□□□□ -0.07
GDF1P27539 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.6□□□□□ -0.07
GDF1P27539 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
GDF1P27539 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.6□□□□□ -0.07
GDF1P27539 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.6□□□□□ -0.07
GDF1P27539 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.6□□□□□ -0.07
GDF1P27539 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.6□□□□□ -0.07
GDF1P27539 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GDF1P27539 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.6□□□□□ -0.07
GDF1P27539 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.6□□□□□ -0.07
GDF1P27539 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GDF1P27539 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
GDF1P27539 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
GDF1P27539 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
GDF1P27539 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.6□□□□□ -0.07
GDF1P27539 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.6□□□□□ -0.07
GDF1P27539 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GDF1P27539 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
GDF1P27539 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GDF1P27539 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.59□□□□□ -0.07
GDF1P27539 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
GDF1P27539 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.59□□□□□ -0.07
GDF1P27539 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.59□□□□□ -0.07
GDF1P27539 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms