Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MED15P5-201ENST00000423150 992 ntBASIC13.87□□□□□ -0.19
CCL1P22362 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL1P22362 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.87□□□□□ -0.19
CCL1P22362 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 KRT18P3-201ENST00000451602 1288 ntBASIC13.87□□□□□ -0.19
CCL1P22362 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL1P22362 RN7SL589P-201ENST00000481268 310 ntBASIC13.87□□□□□ -0.19
CCL1P22362 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL1P22362 FAM86C2P-203ENST00000528684 1004 ntBASIC13.87□□□□□ -0.19
CCL1P22362 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.87□□□□□ -0.19
CCL1P22362 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.87□□□□□ -0.19
CCL1P22362 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.87□□□□□ -0.19
CCL1P22362 AC106730.1-201ENST00000566722 1090 ntBASIC13.87□□□□□ -0.19
CCL1P22362 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.87□□□□□ -0.19
CCL1P22362 AC140113.2-201ENST00000604370 208 ntBASIC13.87□□□□□ -0.19
CCL1P22362 AC091812.2-201ENST00000619081 385 ntBASIC13.87□□□□□ -0.19
CCL1P22362 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL1P22362 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL1P22362 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCL1P22362 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CCL1P22362 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCL1P22362 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL1P22362 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL1P22362 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL1P22362 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCL1P22362 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCL1P22362 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CCL1P22362 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCL1P22362 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
CCL1P22362 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL1P22362 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCL1P22362 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL1P22362 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL1P22362 REXO1L1P-202ENST00000608646 1974 ntBASIC13.86□□□□□ -0.19
CCL1P22362 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CCL1P22362 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL1P22362 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CCL1P22362 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.86□□□□□ -0.19
CCL1P22362 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.86□□□□□ -0.19
CCL1P22362 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL1P22362 AL671277.1-201ENST00000429656 993 ntBASIC13.86□□□□□ -0.19
CCL1P22362 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCL1P22362 SLC25A1P1-201ENST00000528351 927 ntBASIC13.86□□□□□ -0.19
CCL1P22362 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.86□□□□□ -0.19
CCL1P22362 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL1P22362 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCL1P22362 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
CCL1P22362 AC011270.2-201ENST00000624293 2550 ntBASIC13.86□□□□□ -0.19
CCL1P22362 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL1P22362 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL1P22362 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL1P22362 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
CCL1P22362 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL1P22362 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL1P22362 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL1P22362 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CCL1P22362 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.85□□□□□ -0.19
CCL1P22362 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCL1P22362 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL1P22362 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL1P22362 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCL1P22362 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL1P22362 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CCL1P22362 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL1P22362 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 MIR346-201ENST00000362234 95 ntBASIC13.85□□□□□ -0.19
CCL1P22362 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.85□□□□□ -0.19
CCL1P22362 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms