Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.3■□□□□ 0.2
VCLP18206 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.3■□□□□ 0.2
VCLP18206 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
VCLP18206 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
VCLP18206 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.3■□□□□ 0.2
VCLP18206 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VCLP18206 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VCLP18206 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.3■□□□□ 0.2
VCLP18206 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VCLP18206 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.3■□□□□ 0.2
VCLP18206 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VCLP18206 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VCLP18206 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.29■□□□□ 0.2
VCLP18206 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.29■□□□□ 0.2
VCLP18206 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
VCLP18206 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.29■□□□□ 0.2
VCLP18206 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 PKD1P5-201ENST00000532415 10291 ntBASIC16.29■□□□□ 0.2
VCLP18206 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.29■□□□□ 0.2
VCLP18206 AC005237.2-201ENST00000434368 219 ntBASIC16.29■□□□□ 0.2
VCLP18206 AL592309.1-201ENST00000443127 649 ntBASIC16.29■□□□□ 0.2
VCLP18206 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.29■□□□□ 0.2
VCLP18206 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
VCLP18206 AC079140.1-201ENST00000508039 487 ntBASIC16.29■□□□□ 0.2
VCLP18206 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.29■□□□□ 0.2
VCLP18206 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.29■□□□□ 0.2
VCLP18206 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
VCLP18206 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.29■□□□□ 0.2
VCLP18206 AC022145.2-201ENST00000598203 171 ntBASIC16.29■□□□□ 0.2
VCLP18206 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.29■□□□□ 0.2
VCLP18206 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.29■□□□□ 0.2
VCLP18206 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VCLP18206 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.29■□□□□ 0.2
VCLP18206 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.29■□□□□ 0.2
VCLP18206 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VCLP18206 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.29■□□□□ 0.2
VCLP18206 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VCLP18206 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VCLP18206 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.29■□□□□ 0.2
VCLP18206 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.29■□□□□ 0.2
VCLP18206 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VCLP18206 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VCLP18206 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VCLP18206 GPAA1P2-202ENST00000606848 1787 ntBASIC16.28■□□□□ 0.2
VCLP18206 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.28■□□□□ 0.2
VCLP18206 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.28■□□□□ 0.2
VCLP18206 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VCLP18206 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VCLP18206 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
VCLP18206 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.28■□□□□ 0.2
VCLP18206 KRT8P48-201ENST00000515599 1220 ntBASIC16.28■□□□□ 0.2
VCLP18206 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.28■□□□□ 0.2
VCLP18206 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 KRT8P23-201ENST00000560090 1207 ntBASIC16.28■□□□□ 0.2
VCLP18206 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.28■□□□□ 0.2
VCLP18206 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.28■□□□□ 0.2
VCLP18206 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.28■□□□□ 0.2
VCLP18206 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.28■□□□□ 0.2
VCLP18206 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VCLP18206 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms