Protein–RNA interactions for Protein: P17661

DES, Desmin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DESP17661 YBX2P1-201ENST00000394192 760 ntBASIC17.11■□□□□ 0.33
DESP17661 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.11■□□□□ 0.33
DESP17661 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.11■□□□□ 0.33
DESP17661 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.11■□□□□ 0.33
DESP17661 AL355306.1-201ENST00000415580 579 ntBASIC17.11■□□□□ 0.33
DESP17661 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.11■□□□□ 0.33
DESP17661 SPDYE11-202ENST00000450699 704 ntBASIC17.11■□□□□ 0.33
DESP17661 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
DESP17661 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.11■□□□□ 0.33
DESP17661 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.11■□□□□ 0.33
DESP17661 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.11■□□□□ 0.33
DESP17661 SPDYE9P-201ENST00000570642 692 ntBASIC17.11■□□□□ 0.33
DESP17661 SPDYE10P-202ENST00000612005 668 ntBASIC17.11■□□□□ 0.33
DESP17661 SPDYE8P-202ENST00000612377 668 ntBASIC17.11■□□□□ 0.33
DESP17661 C20orf181-201ENST00000623918 480 ntBASIC17.11■□□□□ 0.33
DESP17661 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DESP17661 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DESP17661 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DESP17661 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DESP17661 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
DESP17661 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DESP17661 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC17.11■□□□□ 0.33
DESP17661 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DESP17661 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.11■□□□□ 0.33
DESP17661 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DESP17661 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
DESP17661 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.1■□□□□ 0.33
DESP17661 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.1■□□□□ 0.33
DESP17661 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
DESP17661 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
DESP17661 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.1■□□□□ 0.33
DESP17661 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.1■□□□□ 0.33
DESP17661 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 TFAMP1-201ENST00000412727 736 ntBASIC17.1■□□□□ 0.33
DESP17661 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.1■□□□□ 0.33
DESP17661 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 MKNK2P1-201ENST00000437526 628 ntBASIC17.1■□□□□ 0.33
DESP17661 IGHV3-62-201ENST00000520057 340 ntBASIC17.1■□□□□ 0.33
DESP17661 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 AL135744.1-201ENST00000565098 629 ntBASIC17.1■□□□□ 0.33
DESP17661 AC024267.1-201ENST00000582320 895 ntBASIC17.1■□□□□ 0.33
DESP17661 AC099522.2-201ENST00000607001 744 ntBASIC17.1■□□□□ 0.33
DESP17661 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
DESP17661 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
DESP17661 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
DESP17661 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DESP17661 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
DESP17661 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
DESP17661 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
DESP17661 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DESP17661 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.1■□□□□ 0.33
DESP17661 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.09■□□□□ 0.33
DESP17661 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.09■□□□□ 0.33
DESP17661 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.09■□□□□ 0.33
DESP17661 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.09■□□□□ 0.33
DESP17661 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.09■□□□□ 0.33
DESP17661 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.09■□□□□ 0.33
DESP17661 AC008267.7-201ENST00000624570 1194 ntBASIC17.09■□□□□ 0.33
DESP17661 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
DESP17661 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
DESP17661 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
DESP17661 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.09■□□□□ 0.33
DESP17661 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.09■□□□□ 0.33
DESP17661 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DESP17661 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms