Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BMP4P12644 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BMP4P12644 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BMP4P12644 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
BMP4P12644 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
BMP4P12644 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 AP002414.3-201ENST00000589352 1468 ntBASIC14.89□□□□□ -0.03
BMP4P12644 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.89□□□□□ -0.03
BMP4P12644 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BMP4P12644 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
BMP4P12644 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.89□□□□□ -0.03
BMP4P12644 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.89□□□□□ -0.03
BMP4P12644 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
BMP4P12644 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
BMP4P12644 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.89□□□□□ -0.03
BMP4P12644 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.89□□□□□ -0.03
BMP4P12644 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.89□□□□□ -0.03
BMP4P12644 AC034105.1-201ENST00000563488 319 ntBASIC14.89□□□□□ -0.03
BMP4P12644 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.89□□□□□ -0.03
BMP4P12644 AC079781.4-201ENST00000641908 219 ntBASIC14.89□□□□□ -0.03
BMP4P12644 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
BMP4P12644 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.89□□□□□ -0.03
BMP4P12644 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.89□□□□□ -0.03
BMP4P12644 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.89□□□□□ -0.03
BMP4P12644 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BMP4P12644 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
BMP4P12644 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.89□□□□□ -0.03
BMP4P12644 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.89□□□□□ -0.03
BMP4P12644 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 AC132938.5-201ENST00000624980 1813 ntBASIC14.89□□□□□ -0.03
BMP4P12644 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.89□□□□□ -0.03
BMP4P12644 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BMP4P12644 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BMP4P12644 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.89□□□□□ -0.03
BMP4P12644 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
BMP4P12644 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
BMP4P12644 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.88□□□□□ -0.03
BMP4P12644 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.88□□□□□ -0.03
BMP4P12644 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.88□□□□□ -0.03
BMP4P12644 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
BMP4P12644 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
BMP4P12644 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
BMP4P12644 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.88□□□□□ -0.03
BMP4P12644 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
BMP4P12644 KRT18P27-201ENST00000427733 1299 ntBASIC14.88□□□□□ -0.03
BMP4P12644 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
BMP4P12644 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.88□□□□□ -0.03
BMP4P12644 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.88□□□□□ -0.03
BMP4P12644 STK25P1-201ENST00000585406 838 ntBASIC14.88□□□□□ -0.03
BMP4P12644 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.88□□□□□ -0.03
BMP4P12644 AC004706.3-202ENST00000621574 984 ntBASIC14.88□□□□□ -0.03
BMP4P12644 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
BMP4P12644 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
BMP4P12644 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.88□□□□□ -0.03
BMP4P12644 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
BMP4P12644 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
BMP4P12644 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 TUBB8P12-201ENST00000308911 1335 ntBASIC14.88□□□□□ -0.03
BMP4P12644 TUBB7P-202ENST00000428444 1305 ntBASIC14.88□□□□□ -0.03
BMP4P12644 TUBB8P7-204ENST00000567960 1332 ntBASIC14.88□□□□□ -0.03
BMP4P12644 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BMP4P12644 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
BMP4P12644 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms