Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LAMP1P11279 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LAMP1P11279 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.31■□□□□ 0.04
LAMP1P11279 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.31■□□□□ 0.04
LAMP1P11279 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LAMP1P11279 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.31■□□□□ 0.04
LAMP1P11279 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LAMP1P11279 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.31■□□□□ 0.04
LAMP1P11279 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LAMP1P11279 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LAMP1P11279 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.31■□□□□ 0.04
LAMP1P11279 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LAMP1P11279 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LAMP1P11279 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LAMP1P11279 AC103702.1-201ENST00000548801 2630 ntBASIC15.3■□□□□ 0.04
LAMP1P11279 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMP1P11279 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.3■□□□□ 0.04
LAMP1P11279 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.3■□□□□ 0.04
LAMP1P11279 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LAMP1P11279 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LAMP1P11279 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.3■□□□□ 0.04
LAMP1P11279 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.3■□□□□ 0.04
LAMP1P11279 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 KRT18P3-201ENST00000451602 1288 ntBASIC15.3■□□□□ 0.04
LAMP1P11279 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMP1P11279 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMP1P11279 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.3■□□□□ 0.04
LAMP1P11279 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMP1P11279 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.3■□□□□ 0.04
LAMP1P11279 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LAMP1P11279 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 AC027601.4-201ENST00000611259 610 ntBASIC15.3■□□□□ 0.04
LAMP1P11279 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMP1P11279 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.3■□□□□ 0.04
LAMP1P11279 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMP1P11279 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LAMP1P11279 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMP1P11279 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMP1P11279 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.3■□□□□ 0.04
LAMP1P11279 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LAMP1P11279 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.29■□□□□ 0.04
LAMP1P11279 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.29■□□□□ 0.04
LAMP1P11279 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.29■□□□□ 0.04
LAMP1P11279 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.29■□□□□ 0.04
LAMP1P11279 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 AP001282.1-201ENST00000531301 1499 ntBASIC15.29■□□□□ 0.04
LAMP1P11279 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.29■□□□□ 0.04
LAMP1P11279 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.29■□□□□ 0.04
LAMP1P11279 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
LAMP1P11279 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.29■□□□□ 0.04
LAMP1P11279 MED15P5-201ENST00000423150 992 ntBASIC15.29■□□□□ 0.04
LAMP1P11279 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.29■□□□□ 0.04
LAMP1P11279 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.29■□□□□ 0.04
LAMP1P11279 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.29■□□□□ 0.04
LAMP1P11279 RARRES2P8-201ENST00000566335 367 ntBASIC15.29■□□□□ 0.04
LAMP1P11279 AC106730.1-201ENST00000566722 1090 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms