Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 AC104306.2-201ENST00000451877 341 ntBASIC18.15■□□□□ 0.5
PTPRFP10586 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 AC091804.1-201ENST00000486888 567 ntBASIC18.15■□□□□ 0.5
PTPRFP10586 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPRFP10586 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.15■□□□□ 0.5
PTPRFP10586 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPRFP10586 AL008638.5-201ENST00000623814 1298 ntBASIC18.15■□□□□ 0.5
PTPRFP10586 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PTPRFP10586 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPRFP10586 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 AC106886.4-201ENST00000623557 2502 ntBASIC18.15■□□□□ 0.5
PTPRFP10586 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
PTPRFP10586 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PTPRFP10586 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPRFP10586 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPRFP10586 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPRFP10586 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.15■□□□□ 0.5
PTPRFP10586 RHOQP1-201ENST00000555758 579 ntBASIC18.15■□□□□ 0.5
PTPRFP10586 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPRFP10586 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPRFP10586 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PTPRFP10586 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.14■□□□□ 0.5
PTPRFP10586 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PTPRFP10586 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
PTPRFP10586 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
PTPRFP10586 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.14■□□□□ 0.49
PTPRFP10586 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPRFP10586 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.14■□□□□ 0.49
PTPRFP10586 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPRFP10586 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.14■□□□□ 0.49
PTPRFP10586 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.14■□□□□ 0.49
PTPRFP10586 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.14■□□□□ 0.49
PTPRFP10586 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPRFP10586 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPRFP10586 AL138709.1-201ENST00000614840 1693 ntBASIC18.14■□□□□ 0.49
PTPRFP10586 AC022188.1-201ENST00000620960 1664 ntBASIC18.14■□□□□ 0.49
PTPRFP10586 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.14■□□□□ 0.49
PTPRFP10586 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PTPRFP10586 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
PTPRFP10586 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPRFP10586 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPRFP10586 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPRFP10586 C2orf27AP3-201ENST00000434123 579 ntBASIC18.13■□□□□ 0.49
PTPRFP10586 ACTG1P17-201ENST00000558391 1119 ntBASIC18.13■□□□□ 0.49
PTPRFP10586 AC009486.1-201ENST00000569860 813 ntBASIC18.13■□□□□ 0.49
PTPRFP10586 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPRFP10586 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.13■□□□□ 0.49
PTPRFP10586 AL354718.3-201ENST00000616414 581 ntBASIC18.13■□□□□ 0.49
PTPRFP10586 CR382287.1-201ENST00000623954 586 ntBASIC18.13■□□□□ 0.49
PTPRFP10586 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPRFP10586 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPRFP10586 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPRFP10586 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPRFP10586 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPRFP10586 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPRFP10586 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPRFP10586 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPRFP10586 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPRFP10586 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPRFP10586 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPRFP10586 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPRFP10586 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPRFP10586 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPRFP10586 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPRFP10586 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPRFP10586 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPRFP10586 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPRFP10586 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms