Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.04□□□□□ -0.16
CSF1P09603 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.04□□□□□ -0.16
CSF1P09603 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.04□□□□□ -0.16
CSF1P09603 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CSF1P09603 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 AC132008.2-207ENST00000454517 770 ntBASIC14.04□□□□□ -0.16
CSF1P09603 SCARNA2-201ENST00000458748 420 ntBASIC14.04□□□□□ -0.16
CSF1P09603 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.04□□□□□ -0.16
CSF1P09603 POLD2P1-201ENST00000511220 997 ntBASIC14.04□□□□□ -0.16
CSF1P09603 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.04□□□□□ -0.16
CSF1P09603 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.04□□□□□ -0.16
CSF1P09603 AC106730.1-201ENST00000566722 1090 ntBASIC14.04□□□□□ -0.16
CSF1P09603 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.04□□□□□ -0.16
CSF1P09603 AC011467.2-201ENST00000598425 242 ntBASIC14.04□□□□□ -0.16
CSF1P09603 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.04□□□□□ -0.16
CSF1P09603 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.04□□□□□ -0.16
CSF1P09603 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.04□□□□□ -0.16
CSF1P09603 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CSF1P09603 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CSF1P09603 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CSF1P09603 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
CSF1P09603 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CSF1P09603 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.04□□□□□ -0.16
CSF1P09603 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSF1P09603 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CSF1P09603 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CSF1P09603 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
CSF1P09603 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CSF1P09603 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.03□□□□□ -0.16
CSF1P09603 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.03□□□□□ -0.16
CSF1P09603 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.03□□□□□ -0.16
CSF1P09603 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.03□□□□□ -0.16
CSF1P09603 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.03□□□□□ -0.16
CSF1P09603 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.03□□□□□ -0.16
CSF1P09603 AC139887.3-201ENST00000568585 713 ntBASIC14.03□□□□□ -0.16
CSF1P09603 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.03□□□□□ -0.16
CSF1P09603 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.03□□□□□ -0.16
CSF1P09603 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.03□□□□□ -0.16
CSF1P09603 AC010654.1-201ENST00000615722 808 ntBASIC14.03□□□□□ -0.16
CSF1P09603 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.03□□□□□ -0.16
CSF1P09603 PGM5P2-202ENST00000637225 1043 ntBASIC14.03□□□□□ -0.16
CSF1P09603 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.03□□□□□ -0.16
CSF1P09603 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.03□□□□□ -0.16
CSF1P09603 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.03□□□□□ -0.16
CSF1P09603 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.03□□□□□ -0.16
CSF1P09603 AC148477.5-201ENST00000625164 1645 ntBASIC14.03□□□□□ -0.16
CSF1P09603 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
CSF1P09603 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CSF1P09603 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CSF1P09603 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CSF1P09603 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSF1P09603 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSF1P09603 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CSF1P09603 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSF1P09603 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CSF1P09603 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms