Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.72■□□□□ 0.27
CD48P09326 AC011477.6-201ENST00000604980 1927 ntBASIC16.72■□□□□ 0.27
CD48P09326 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.72■□□□□ 0.27
CD48P09326 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CD48P09326 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.72■□□□□ 0.27
CD48P09326 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CD48P09326 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD48P09326 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.71■□□□□ 0.27
CD48P09326 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.71■□□□□ 0.27
CD48P09326 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 AL136982.4-201ENST00000437689 1740 ntBASIC16.71■□□□□ 0.27
CD48P09326 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.71■□□□□ 0.27
CD48P09326 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
CD48P09326 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.71■□□□□ 0.27
CD48P09326 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.71■□□□□ 0.27
CD48P09326 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CD48P09326 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.71■□□□□ 0.27
CD48P09326 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.71■□□□□ 0.27
CD48P09326 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.71■□□□□ 0.27
CD48P09326 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.71■□□□□ 0.27
CD48P09326 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.71■□□□□ 0.27
CD48P09326 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.71■□□□□ 0.27
CD48P09326 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.71■□□□□ 0.27
CD48P09326 KRT8P23-201ENST00000560090 1207 ntBASIC16.71■□□□□ 0.27
CD48P09326 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.71■□□□□ 0.27
CD48P09326 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.71■□□□□ 0.27
CD48P09326 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.71■□□□□ 0.27
CD48P09326 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.71■□□□□ 0.27
CD48P09326 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.71■□□□□ 0.27
CD48P09326 AC084121.4-201ENST00000641598 221 ntBASIC16.71■□□□□ 0.27
CD48P09326 AF228730.8-201ENST00000642140 221 ntBASIC16.71■□□□□ 0.27
CD48P09326 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.71■□□□□ 0.27
CD48P09326 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.71■□□□□ 0.27
CD48P09326 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CD48P09326 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.71■□□□□ 0.27
CD48P09326 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.71■□□□□ 0.27
CD48P09326 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD48P09326 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.71■□□□□ 0.27
CD48P09326 AC092384.3-202ENST00000564646 2873 ntBASIC16.71■□□□□ 0.26
CD48P09326 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CD48P09326 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CD48P09326 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.7■□□□□ 0.26
CD48P09326 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CD48P09326 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD48P09326 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CD48P09326 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CD48P09326 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.7■□□□□ 0.26
CD48P09326 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 BNIP3P1-202ENST00000550043 1585 ntBASIC16.7■□□□□ 0.26
CD48P09326 AP3S2-216ENST00000617003 1561 ntBASIC16.7■□□□□ 0.26
CD48P09326 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 AP001282.1-201ENST00000531301 1499 ntBASIC16.7■□□□□ 0.26
CD48P09326 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CD48P09326 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.7■□□□□ 0.26
CD48P09326 RPSAP43-201ENST00000402237 625 ntBASIC16.7■□□□□ 0.26
CD48P09326 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.7■□□□□ 0.26
CD48P09326 FAM58DP-201ENST00000428076 619 ntBASIC16.7■□□□□ 0.26
CD48P09326 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.7■□□□□ 0.26
CD48P09326 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.7■□□□□ 0.26
CD48P09326 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CD48P09326 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.7■□□□□ 0.26
CD48P09326 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.7■□□□□ 0.26
CD48P09326 AC093520.2-201ENST00000561830 333 ntBASIC16.7■□□□□ 0.26
CD48P09326 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.7■□□□□ 0.26
CD48P09326 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.7■□□□□ 0.26
CD48P09326 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.7■□□□□ 0.26
CD48P09326 AC024267.1-201ENST00000582320 895 ntBASIC16.7■□□□□ 0.26
CD48P09326 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.7■□□□□ 0.26
CD48P09326 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms