Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.91■□□□□ 0.3
RB1P06400 RPL13AP20-201ENST00000459725 609 ntBASIC16.91■□□□□ 0.3
RB1P06400 VDAC1P7-201ENST00000462417 847 ntBASIC16.91■□□□□ 0.3
RB1P06400 SLED1-202ENST00000512051 380 ntBASIC16.91■□□□□ 0.3
RB1P06400 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RB1P06400 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.91■□□□□ 0.3
RB1P06400 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.91■□□□□ 0.3
RB1P06400 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.91■□□□□ 0.3
RB1P06400 AC091271.1-201ENST00000611877 1162 ntBASIC16.91■□□□□ 0.3
RB1P06400 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.91■□□□□ 0.3
RB1P06400 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
RB1P06400 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.91■□□□□ 0.3
RB1P06400 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RB1P06400 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.9■□□□□ 0.3
RB1P06400 AC026954.1-201ENST00000429771 1293 ntBASIC16.9■□□□□ 0.3
RB1P06400 C2orf27AP3-201ENST00000434123 579 ntBASIC16.9■□□□□ 0.3
RB1P06400 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.9■□□□□ 0.3
RB1P06400 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.9■□□□□ 0.3
RB1P06400 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 AC006033.1-201ENST00000440505 426 ntBASIC16.9■□□□□ 0.3
RB1P06400 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.9■□□□□ 0.3
RB1P06400 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 KRT90P-201ENST00000549264 1064 ntBASIC16.9■□□□□ 0.3
RB1P06400 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RB1P06400 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.9■□□□□ 0.3
RB1P06400 AC023310.1-201ENST00000554836 735 ntBASIC16.9■□□□□ 0.3
RB1P06400 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.9■□□□□ 0.3
RB1P06400 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.9■□□□□ 0.3
RB1P06400 AL354718.3-201ENST00000616414 581 ntBASIC16.9■□□□□ 0.3
RB1P06400 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 CR382287.1-201ENST00000623954 586 ntBASIC16.9■□□□□ 0.3
RB1P06400 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.9■□□□□ 0.3
RB1P06400 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RB1P06400 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.9■□□□□ 0.3
RB1P06400 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.9■□□□□ 0.3
RB1P06400 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.9■□□□□ 0.3
RB1P06400 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RB1P06400 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RB1P06400 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RB1P06400 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
RB1P06400 BNIP3P1-202ENST00000550043 1585 ntBASIC16.89■□□□□ 0.3
RB1P06400 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RB1P06400 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RB1P06400 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.3
RB1P06400 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RB1P06400 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.89■□□□□ 0.29
RB1P06400 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RB1P06400 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RB1P06400 AC092506.1-202ENST00000401022 528 ntBASIC16.89■□□□□ 0.29
RB1P06400 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.89■□□□□ 0.29
RB1P06400 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.89■□□□□ 0.29
RB1P06400 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.89■□□□□ 0.29
RB1P06400 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.89■□□□□ 0.29
RB1P06400 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.89■□□□□ 0.29
RB1P06400 AC005252.2-201ENST00000624630 1141 ntBASIC16.89■□□□□ 0.29
RB1P06400 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.89■□□□□ 0.29
RB1P06400 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.89■□□□□ 0.29
RB1P06400 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.89■□□□□ 0.29
RB1P06400 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RB1P06400 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms