Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
P04436 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
P04436 AC006449.6-201ENST00000612330 2296 ntBASIC14.72□□□□□ -0.05
P04436 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
P04436 AL136982.4-201ENST00000437689 1740 ntBASIC14.72□□□□□ -0.05
P04436 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
P04436 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
P04436 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
P04436 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.71□□□□□ -0.05
P04436 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
P04436 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
P04436 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
P04436 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
P04436 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
P04436 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.71□□□□□ -0.05
P04436 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
P04436 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.71□□□□□ -0.05
P04436 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.71□□□□□ -0.05
P04436 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.71□□□□□ -0.05
P04436 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.71□□□□□ -0.05
P04436 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.71□□□□□ -0.05
P04436 AL844908.2-201ENST00000609461 460 ntBASIC14.71□□□□□ -0.05
P04436 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
P04436 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.71□□□□□ -0.05
P04436 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 AL691432.1-201ENST00000596308 1422 ntBASIC14.71□□□□□ -0.05
P04436 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.71□□□□□ -0.05
P04436 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
P04436 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
P04436 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.71□□□□□ -0.05
P04436 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
P04436 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
P04436 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.71□□□□□ -0.06
P04436 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
P04436 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
P04436 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.71□□□□□ -0.06
P04436 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
P04436 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
P04436 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
P04436 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
P04436 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
P04436 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
P04436 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
P04436 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
P04436 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.71□□□□□ -0.06
P04436 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
P04436 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
P04436 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.7□□□□□ -0.06
P04436 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
P04436 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.7□□□□□ -0.06
P04436 FO393414.2-201ENST00000405153 598 ntBASIC14.7□□□□□ -0.06
P04436 HAUS4P1-201ENST00000406739 1145 ntBASIC14.7□□□□□ -0.06
P04436 MRPS18AP1-201ENST00000414458 589 ntBASIC14.7□□□□□ -0.06
P04436 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.7□□□□□ -0.06
P04436 AC009477.1-201ENST00000452936 217 ntBASIC14.7□□□□□ -0.06
P04436 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.7□□□□□ -0.06
P04436 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.7□□□□□ -0.06
P04436 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.7□□□□□ -0.06
P04436 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.7□□□□□ -0.06
P04436 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.7□□□□□ -0.06
P04436 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
P04436 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
P04436 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.7□□□□□ -0.06
P04436 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.7□□□□□ -0.06
P04436 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
P04436 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.7□□□□□ -0.06
P04436 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
P04436 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms