Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PDGFAP04085 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PDGFAP04085 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PDGFAP04085 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 AL353779.1-201ENST00000434793 351 ntBASIC15.15■□□□□ 0.02
PDGFAP04085 AC017007.3-201ENST00000479865 435 ntBASIC15.15■□□□□ 0.02
PDGFAP04085 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.15■□□□□ 0.02
PDGFAP04085 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.15■□□□□ 0.02
PDGFAP04085 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.15■□□□□ 0.02
PDGFAP04085 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.15■□□□□ 0.02
PDGFAP04085 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.15■□□□□ 0.02
PDGFAP04085 AL133215.2-201ENST00000609242 977 ntBASIC15.15■□□□□ 0.02
PDGFAP04085 SPTSSB-204ENST00000617024 1292 ntBASIC15.15■□□□□ 0.02
PDGFAP04085 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.15■□□□□ 0.02
PDGFAP04085 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.15■□□□□ 0.02
PDGFAP04085 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.15■□□□□ 0.02
PDGFAP04085 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PDGFAP04085 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PDGFAP04085 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.15■□□□□ 0.02
PDGFAP04085 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.15■□□□□ 0.02
PDGFAP04085 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PDGFAP04085 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.15■□□□□ 0.02
PDGFAP04085 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PDGFAP04085 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.15■□□□□ 0.02
PDGFAP04085 AC105917.1-201ENST00000506637 2539 ntBASIC15.14■□□□□ 0.01
PDGFAP04085 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
PDGFAP04085 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFAP04085 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFAP04085 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PDGFAP04085 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PDGFAP04085 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFAP04085 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
PDGFAP04085 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 FAM220BP-201ENST00000377689 816 ntBASIC15.14■□□□□ 0.01
PDGFAP04085 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
PDGFAP04085 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.14■□□□□ 0.01
PDGFAP04085 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFAP04085 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
PDGFAP04085 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
PDGFAP04085 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFAP04085 INE1-201ENST00000456273 945 ntBASIC15.14■□□□□ 0.01
PDGFAP04085 GPR53P-205ENST00000457298 1084 ntBASIC15.14■□□□□ 0.01
PDGFAP04085 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.14■□□□□ 0.01
PDGFAP04085 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.14■□□□□ 0.01
PDGFAP04085 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PDGFAP04085 AC135586.1-201ENST00000539323 574 ntBASIC15.14■□□□□ 0.01
PDGFAP04085 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PDGFAP04085 AC104794.3-201ENST00000566840 1248 ntBASIC15.14■□□□□ 0.01
PDGFAP04085 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFAP04085 AC105021.1-202ENST00000570572 669 ntBASIC15.14■□□□□ 0.01
PDGFAP04085 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.14■□□□□ 0.01
PDGFAP04085 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.14■□□□□ 0.01
PDGFAP04085 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PDGFAP04085 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PDGFAP04085 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFAP04085 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.14■□□□□ 0.01
PDGFAP04085 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PDGFAP04085 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.14■□□□□ 0.01
PDGFAP04085 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PDGFAP04085 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PDGFAP04085 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFAP04085 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms