Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQA2P01906 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 AL592424.1-201ENST00000563624 1536 ntBASIC14.56□□□□□ -0.08
HLA-DQA2P01906 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 CDC14C-201ENST00000428251 1719 ntBASIC14.56□□□□□ -0.08
HLA-DQA2P01906 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 MIR648-201ENST00000385046 94 ntBASIC14.56□□□□□ -0.08
HLA-DQA2P01906 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 AC009947.1-201ENST00000444350 727 ntBASIC14.56□□□□□ -0.08
HLA-DQA2P01906 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 RNA5SP415-201ENST00000517246 115 ntBASIC14.56□□□□□ -0.08
HLA-DQA2P01906 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DQA2P01906 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms