Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRAP01903 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRAP01903 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRAP01903 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRAP01903 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DRAP01903 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRAP01903 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DRAP01903 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRAP01903 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRAP01903 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRAP01903 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HLA-DRAP01903 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HLA-DRAP01903 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DRAP01903 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.32■□□□□ 0.36
HLA-DRAP01903 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HLA-DRAP01903 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DRAP01903 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HLA-DRAP01903 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HLA-DRAP01903 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DRAP01903 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DRAP01903 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.32■□□□□ 0.36
HLA-DRAP01903 MTND6P24-201ENST00000440466 518 ntBASIC17.32■□□□□ 0.36
HLA-DRAP01903 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.32■□□□□ 0.36
HLA-DRAP01903 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DRAP01903 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HLA-DRAP01903 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DRAP01903 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DRAP01903 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DRAP01903 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DRAP01903 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 AC011477.6-201ENST00000604980 1927 ntBASIC17.31■□□□□ 0.36
HLA-DRAP01903 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 AL035456.1-201ENST00000456064 1369 ntBASIC17.31■□□□□ 0.36
HLA-DRAP01903 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DRAP01903 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 CNN2P2-201ENST00000443536 909 ntBASIC17.31■□□□□ 0.36
HLA-DRAP01903 CNN2P3-201ENST00000450201 906 ntBASIC17.31■□□□□ 0.36
HLA-DRAP01903 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.31■□□□□ 0.36
HLA-DRAP01903 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.31■□□□□ 0.36
HLA-DRAP01903 AL136317.3-201ENST00000618497 906 ntBASIC17.31■□□□□ 0.36
HLA-DRAP01903 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DRAP01903 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DRAP01903 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DRAP01903 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DRAP01903 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
HLA-DRAP01903 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DRAP01903 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DRAP01903 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DRAP01903 AC007950.2-201ENST00000615045 2347 ntBASIC17.3■□□□□ 0.36
HLA-DRAP01903 TUBB3P1-201ENST00000405796 1332 ntBASIC17.3■□□□□ 0.36
HLA-DRAP01903 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms