Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.01■□□□□ 0.15
PDGFBP01127 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFBP01127 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.01■□□□□ 0.15
PDGFBP01127 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.01■□□□□ 0.15
PDGFBP01127 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.01■□□□□ 0.15
PDGFBP01127 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFBP01127 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.01■□□□□ 0.15
PDGFBP01127 FGFR3P5-201ENST00000564496 886 ntBASIC16.01■□□□□ 0.15
PDGFBP01127 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.01■□□□□ 0.15
PDGFBP01127 AC145423.3-201ENST00000615987 467 ntBASIC16.01■□□□□ 0.15
PDGFBP01127 AP001505.2-201ENST00000616815 443 ntBASIC16.01■□□□□ 0.15
PDGFBP01127 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFBP01127 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.01■□□□□ 0.15
PDGFBP01127 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFBP01127 BCL2-203ENST00000589955 5011 ntBASIC16.01■□□□□ 0.15
PDGFBP01127 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFBP01127 PCGF3-213ENST00000620529 1899 ntBASIC16.01■□□□□ 0.15
PDGFBP01127 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PDGFBP01127 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PDGFBP01127 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PDGFBP01127 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PDGFBP01127 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDGFBP01127 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFBP01127 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PDGFBP01127 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PDGFBP01127 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDGFBP01127 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFBP01127 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16■□□□□ 0.15
PDGFBP01127 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDGFBP01127 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFBP01127 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PDGFBP01127 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PDGFBP01127 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16■□□□□ 0.15
PDGFBP01127 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16■□□□□ 0.15
PDGFBP01127 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PDGFBP01127 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFBP01127 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PDGFBP01127 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDGFBP01127 AL355334.1-201ENST00000417713 215 ntBASIC16■□□□□ 0.15
PDGFBP01127 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16■□□□□ 0.15
PDGFBP01127 SPTLC1P5-201ENST00000450718 252 ntBASIC16■□□□□ 0.15
PDGFBP01127 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16■□□□□ 0.15
PDGFBP01127 AC134698.3-201ENST00000523880 214 ntBASIC16■□□□□ 0.15
PDGFBP01127 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16■□□□□ 0.15
PDGFBP01127 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16■□□□□ 0.15
PDGFBP01127 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16■□□□□ 0.15
PDGFBP01127 AP003419.4-201ENST00000616071 517 ntBASIC16■□□□□ 0.15
PDGFBP01127 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFBP01127 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PDGFBP01127 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16■□□□□ 0.15
PDGFBP01127 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PDGFBP01127 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16■□□□□ 0.15
PDGFBP01127 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16■□□□□ 0.15
PDGFBP01127 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFBP01127 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16■□□□□ 0.15
PDGFBP01127 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16■□□□□ 0.15
PDGFBP01127 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFBP01127 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFBP01127 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFBP01127 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.99■□□□□ 0.15
PDGFBP01127 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.99■□□□□ 0.15
PDGFBP01127 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 AL138709.1-201ENST00000614840 1693 ntBASIC15.99■□□□□ 0.15
PDGFBP01127 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
PDGFBP01127 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.99■□□□□ 0.15
PDGFBP01127 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.99■□□□□ 0.15
PDGFBP01127 AC016700.1-201ENST00000429424 312 ntBASIC15.99■□□□□ 0.15
PDGFBP01127 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.99■□□□□ 0.15
PDGFBP01127 FTLP1-201ENST00000449155 526 ntBASIC15.99■□□□□ 0.15
PDGFBP01127 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.99■□□□□ 0.15
PDGFBP01127 AC008267.1-201ENST00000474858 1069 ntBASIC15.99■□□□□ 0.15
PDGFBP01127 SLED1-202ENST00000512051 380 ntBASIC15.99■□□□□ 0.15
PDGFBP01127 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.99■□□□□ 0.15
PDGFBP01127 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.99■□□□□ 0.15
PDGFBP01127 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.99■□□□□ 0.15
PDGFBP01127 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PDGFBP01127 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.99■□□□□ 0.15
PDGFBP01127 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.99■□□□□ 0.15
PDGFBP01127 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PDGFBP01127 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFBP01127 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PDGFBP01127 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms