Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.76■□□□□ 0.59
CDKL5O76039 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDKL5O76039 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.76■□□□□ 0.59
CDKL5O76039 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 AP3S2-216ENST00000617003 1561 ntBASIC18.76■□□□□ 0.59
CDKL5O76039 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
CDKL5O76039 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.75■□□□□ 0.59
CDKL5O76039 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL5O76039 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDKL5O76039 AL691432.1-201ENST00000596308 1422 ntBASIC18.75■□□□□ 0.59
CDKL5O76039 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CDKL5O76039 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL5O76039 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.75■□□□□ 0.59
CDKL5O76039 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CDKL5O76039 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL5O76039 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL5O76039 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL5O76039 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CDKL5O76039 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL5O76039 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.75■□□□□ 0.59
CDKL5O76039 AC004461.1-201ENST00000412461 403 ntBASIC18.75■□□□□ 0.59
CDKL5O76039 AL627223.1-201ENST00000416693 442 ntBASIC18.75■□□□□ 0.59
CDKL5O76039 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.75■□□□□ 0.59
CDKL5O76039 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.75■□□□□ 0.59
CDKL5O76039 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
CDKL5O76039 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.75■□□□□ 0.59
CDKL5O76039 AC092865.5-201ENST00000545435 363 ntBASIC18.75■□□□□ 0.59
CDKL5O76039 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.75■□□□□ 0.59
CDKL5O76039 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.75■□□□□ 0.59
CDKL5O76039 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL5O76039 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.75■□□□□ 0.59
CDKL5O76039 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.75■□□□□ 0.59
CDKL5O76039 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL5O76039 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL5O76039 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL5O76039 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL5O76039 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL5O76039 AC134407.2-201ENST00000625089 1978 ntBASIC18.75■□□□□ 0.59
CDKL5O76039 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDKL5O76039 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CDKL5O76039 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CDKL5O76039 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.74■□□□□ 0.59
CDKL5O76039 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CDKL5O76039 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CDKL5O76039 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.74■□□□□ 0.59
CDKL5O76039 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDKL5O76039 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CDKL5O76039 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.74■□□□□ 0.59
CDKL5O76039 AC004987.2-201ENST00000395959 1148 ntBASIC18.74■□□□□ 0.59
CDKL5O76039 AC211486.1-202ENST00000416371 468 ntBASIC18.74■□□□□ 0.59
CDKL5O76039 RPS8P6-201ENST00000426177 609 ntBASIC18.74■□□□□ 0.59
CDKL5O76039 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 AL139010.1-201ENST00000454878 894 ntBASIC18.74■□□□□ 0.59
CDKL5O76039 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.74■□□□□ 0.59
CDKL5O76039 AC211476.1-201ENST00000503899 468 ntBASIC18.74■□□□□ 0.59
CDKL5O76039 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.74■□□□□ 0.59
CDKL5O76039 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.74■□□□□ 0.59
CDKL5O76039 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
CDKL5O76039 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.74■□□□□ 0.59
CDKL5O76039 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.74■□□□□ 0.59
CDKL5O76039 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
CDKL5O76039 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.74■□□□□ 0.59
CDKL5O76039 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
CDKL5O76039 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.74■□□□□ 0.59
CDKL5O76039 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.74■□□□□ 0.59
CDKL5O76039 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CDKL5O76039 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL5O76039 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDKL5O76039 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDKL5O76039 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CDKL5O76039 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDKL5O76039 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDKL5O76039 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDKL5O76039 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.73■□□□□ 0.59
CDKL5O76039 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDKL5O76039 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CDKL5O76039 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms