Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC023141.5-201ENST00000458585 616 ntBASIC14.39□□□□□ -0.11
TRAF3IP2O43734 ALG1L8P-201ENST00000533887 760 ntBASIC14.39□□□□□ -0.11
TRAF3IP2O43734 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 MIR1233-2-201ENST00000408138 82 ntBASIC14.38□□□□□ -0.11
TRAF3IP2O43734 MIR1233-1-201ENST00000408722 82 ntBASIC14.38□□□□□ -0.11
TRAF3IP2O43734 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 CNN2P11-201ENST00000429351 262 ntBASIC14.38□□□□□ -0.11
TRAF3IP2O43734 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF3IP2O43734 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 AC068587.6-202ENST00000641839 5619 ntBASIC14.37□□□□□ -0.11
TRAF3IP2O43734 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.37□□□□□ -0.11
TRAF3IP2O43734 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 RPS8P6-201ENST00000426177 609 ntBASIC14.37□□□□□ -0.11
TRAF3IP2O43734 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 AC027612.4-201ENST00000605371 583 ntBASIC14.37□□□□□ -0.11
TRAF3IP2O43734 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAF3IP2O43734 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms