Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDELR3O43731 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDELR3O43731 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
KDELR3O43731 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KDELR3O43731 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.3■□□□□ 0.2
KDELR3O43731 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.3■□□□□ 0.2
KDELR3O43731 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KDELR3O43731 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.3■□□□□ 0.2
KDELR3O43731 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KDELR3O43731 HMGN1P19-201ENST00000436976 333 ntBASIC16.3■□□□□ 0.2
KDELR3O43731 PHKG1P2-201ENST00000457537 863 ntBASIC16.3■□□□□ 0.2
KDELR3O43731 RN7SL618P-201ENST00000477850 296 ntBASIC16.3■□□□□ 0.2
KDELR3O43731 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.3■□□□□ 0.2
KDELR3O43731 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KDELR3O43731 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.3■□□□□ 0.2
KDELR3O43731 AC010336.2-201ENST00000564226 506 ntBASIC16.3■□□□□ 0.2
KDELR3O43731 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KDELR3O43731 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.3■□□□□ 0.2
KDELR3O43731 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.3■□□□□ 0.2
KDELR3O43731 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
KDELR3O43731 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDELR3O43731 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KDELR3O43731 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDELR3O43731 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KDELR3O43731 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KDELR3O43731 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDELR3O43731 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
KDELR3O43731 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KDELR3O43731 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KDELR3O43731 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.29■□□□□ 0.2
KDELR3O43731 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.29■□□□□ 0.2
KDELR3O43731 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
KDELR3O43731 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
KDELR3O43731 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
KDELR3O43731 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.29■□□□□ 0.2
KDELR3O43731 AC009477.1-201ENST00000452936 217 ntBASIC16.29■□□□□ 0.2
KDELR3O43731 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.29■□□□□ 0.2
KDELR3O43731 INGX-202ENST00000489074 768 ntBASIC16.29■□□□□ 0.2
KDELR3O43731 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.29■□□□□ 0.2
KDELR3O43731 ZNF890P-202ENST00000530367 1156 ntBASIC16.29■□□□□ 0.2
KDELR3O43731 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.29■□□□□ 0.2
KDELR3O43731 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.29■□□□□ 0.2
KDELR3O43731 AC011467.4-201ENST00000594891 528 ntBASIC16.29■□□□□ 0.2
KDELR3O43731 AL450472.2-201ENST00000603663 1156 ntBASIC16.29■□□□□ 0.2
KDELR3O43731 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
KDELR3O43731 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.29■□□□□ 0.2
KDELR3O43731 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.29■□□□□ 0.2
KDELR3O43731 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.29■□□□□ 0.2
KDELR3O43731 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.29■□□□□ 0.2
KDELR3O43731 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
KDELR3O43731 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
KDELR3O43731 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.29■□□□□ 0.2
KDELR3O43731 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDELR3O43731 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
KDELR3O43731 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
KDELR3O43731 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.28■□□□□ 0.2
KDELR3O43731 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.28■□□□□ 0.2
KDELR3O43731 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.28■□□□□ 0.2
KDELR3O43731 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.28■□□□□ 0.2
KDELR3O43731 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.28■□□□□ 0.2
KDELR3O43731 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.28■□□□□ 0.2
KDELR3O43731 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KDELR3O43731 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.28■□□□□ 0.2
KDELR3O43731 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.28■□□□□ 0.2
KDELR3O43731 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.28■□□□□ 0.2
KDELR3O43731 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
KDELR3O43731 SPCS2P1-201ENST00000561636 679 ntBASIC16.28■□□□□ 0.2
KDELR3O43731 AC009407.1-201ENST00000568958 598 ntBASIC16.28■□□□□ 0.2
KDELR3O43731 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms