Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 ELL2P1-201ENST00000413990 1906 ntBASIC15.15■□□□□ 0.02
CLCA1A8K7I4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 AC005412.3-201ENST00000580309 715 ntBASIC15.15■□□□□ 0.02
CLCA1A8K7I4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 AL645728.2-201ENST00000641974 660 ntBASIC15.15■□□□□ 0.02
CLCA1A8K7I4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 AC112504.1-201ENST00000623415 1841 ntBASIC15.15■□□□□ 0.02
CLCA1A8K7I4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 KRT18P28-201ENST00000453838 1332 ntBASIC15.15■□□□□ 0.02
CLCA1A8K7I4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCA1A8K7I4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 AC092919.2-201ENST00000623631 1645 ntBASIC15.14■□□□□ 0.01
CLCA1A8K7I4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 AC068587.6-202ENST00000641839 5619 ntBASIC15.14■□□□□ 0.01
CLCA1A8K7I4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 METTL21AP1-201ENST00000438852 635 ntBASIC15.14■□□□□ 0.01
CLCA1A8K7I4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 CDC14C-201ENST00000428251 1719 ntBASIC15.14■□□□□ 0.01
CLCA1A8K7I4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 AL671710.1-201ENST00000610245 2349 ntBASIC15.14■□□□□ 0.01
CLCA1A8K7I4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCA1A8K7I4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms