Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00473A8K010 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00473A8K010 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00473A8K010 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00473A8K010 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC00473A8K010 AC020658.6-201ENST00000623564 1870 ntBASIC13.16□□□□□ -0.3
LINC00473A8K010 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00473A8K010 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00473A8K010 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00473A8K010 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00473A8K010 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00473A8K010 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00473A8K010 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00473A8K010 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00473A8K010 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00473A8K010 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00473A8K010 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00473A8K010 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00473A8K010 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00473A8K010 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00473A8K010 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00473A8K010 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LINC00473A8K010 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00473A8K010 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00473A8K010 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
LINC00473A8K010 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LINC00473A8K010 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 GPX1P2-201ENST00000429271 606 ntBASIC13.15□□□□□ -0.3
LINC00473A8K010 TPM4P1-201ENST00000436100 807 ntBASIC13.15□□□□□ -0.3
LINC00473A8K010 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00473A8K010 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00473A8K010 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00473A8K010 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00473A8K010 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00473A8K010 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00473A8K010 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00473A8K010 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LINC00473A8K010 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00473A8K010 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00473A8K010 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 AC023824.1-201ENST00000562945 2975 ntBASIC13.15□□□□□ -0.3
LINC00473A8K010 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LINC00473A8K010 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
LINC00473A8K010 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00473A8K010 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00473A8K010 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00473A8K010 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LINC00473A8K010 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.15□□□□□ -0.31
LINC00473A8K010 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LINC00473A8K010 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LINC00473A8K010 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
LINC00473A8K010 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00473A8K010 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00473A8K010 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00473A8K010 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00473A8K010 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00473A8K010 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LINC00473A8K010 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
LINC00473A8K010 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00473A8K010 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00473A8K010 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00473A8K010 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00473A8K010 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00473A8K010 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00473A8K010 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00473A8K010 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00473A8K010 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.14□□□□□ -0.31
LINC00473A8K010 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.14□□□□□ -0.31
LINC00473A8K010 AC074386.1-202ENST00000463561 864 ntBASIC13.14□□□□□ -0.31
LINC00473A8K010 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00473A8K010 RPL13AP23-201ENST00000480739 586 ntBASIC13.14□□□□□ -0.31
LINC00473A8K010 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00473A8K010 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00473A8K010 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00473A8K010 PDPK2P-202ENST00000562415 1191 ntBASIC13.14□□□□□ -0.31
LINC00473A8K010 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.14□□□□□ -0.31
LINC00473A8K010 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00473A8K010 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms