Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AC055876.2-201ENST00000531834 546 ntBASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AC023310.3-201ENST00000557027 670 ntBASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AC243562.2-201ENST00000561247 970 ntBASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AC100756.1-201ENST00000562736 682 ntBASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AC138749.3-201ENST00000567691 622 ntBASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AC116165.1-201ENST00000611806 668 ntBASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AC007431.3-201ENST00000623221 587 ntBASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 REXO1L8P-201ENST00000604378 1897 ntBASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 FLJ38576-201ENST00000623820 2459 ntBASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 AL589987.1-201ENST00000453380 819 ntBASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 RN7SL752P-201ENST00000463779 287 ntBASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 AC074044.1-201ENST00000609673 707 ntBASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
TBC1D3FA6NER0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TBC1D3FA6NER0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3FA6NER0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms