Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 LINC01144-201ENST00000626198 1710 ntBASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC109635.5-201ENST00000533593 962 ntBASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC009093.7-201ENST00000623853 1223 ntBASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 WASH6P-202ENST00000359512 1437 ntBASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SLC22A20-204ENST00000530038 1673 ntBASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PCGF3-213ENST00000620529 1899 ntBASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TCRBV4S1A1TA0A5B7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 RNU1-129P-201ENST00000384064 167 ntBASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC067863.1-201ENST00000494933 530 ntBASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.02□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms