Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 AC091812.3-201ENST00000621362 345 ntBASIC18.07■□□□□ 0.48
TRIM17Q9Y577 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 AL391256.1-201ENST00000443260 1855 ntBASIC18.07■□□□□ 0.48
TRIM17Q9Y577 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 AC015818.8-201ENST00000587907 1519 ntBASIC18.07■□□□□ 0.48
TRIM17Q9Y577 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 CU633904.3-201ENST00000624042 1029 ntBASIC18.06■□□□□ 0.48
TRIM17Q9Y577 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM17Q9Y577 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 AC092068.3-201ENST00000587894 2016 ntBASIC18.05■□□□□ 0.48
TRIM17Q9Y577 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 ACKR1-201ENST00000368121 1240 ntBASIC18.05■□□□□ 0.48
TRIM17Q9Y577 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 KRT18P64-201ENST00000434946 1219 ntBASIC18.05■□□□□ 0.48
TRIM17Q9Y577 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM17Q9Y577 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM17Q9Y577 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM17Q9Y577 AC018735.1-201ENST00000437208 1502 ntBASIC18.04■□□□□ 0.48
TRIM17Q9Y577 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM17Q9Y577 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM17Q9Y577 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM17Q9Y577 REXO1L8P-201ENST00000604378 1897 ntBASIC18.04■□□□□ 0.48
TRIM17Q9Y577 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM17Q9Y577 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM17Q9Y577 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM17Q9Y577 AC004987.2-201ENST00000395959 1148 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms