Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 CROCCP4-201ENST00000457096 498 ntBASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 ENPP7P5-201ENST00000541031 1031 ntBASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 HNRNPUP1-201ENST00000554987 333 ntBASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 AC133552.6-201ENST00000613406 534 ntBASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LEMD3Q9Y2U8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 KRT223P-202ENST00000449164 1292 ntBASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 MIR5189-201ENST00000577370 114 ntBASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 AC018665.1-201ENST00000622927 1362 ntBASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LEMD3Q9Y2U8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 AC092171.3-201ENST00000610122 2651 ntBASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 FLJ38576-201ENST00000623820 2459 ntBASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 AC134915.1-201ENST00000426461 574 ntBASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 RPL13AP25-201ENST00000484130 612 ntBASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 AC104989.1-201ENST00000519711 778 ntBASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LEMD3Q9Y2U8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms