Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AL138799.1-201ENST00000448213 1675 ntBASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 REXO1L1P-202ENST00000608646 1974 ntBASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 PAM16-211ENST00000575848 518 ntTSL 3 BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 HNRNPA1P58-201ENST00000403629 610 ntBASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 BCAS2P2-201ENST00000425064 674 ntBASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 MEG3_2.1-201ENST00000611456 105 ntBASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
RIMBP3Q9UFD9 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 DDX5-235ENST00000630471 473 ntTSL 4 BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RIMBP3Q9UFD9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC24.83■■□□□ 1.56
RIMBP3Q9UFD9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
RIMBP3Q9UFD9 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
RIMBP3Q9UFD9 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
RIMBP3Q9UFD9 B9D1-203ENST00000395615 805 ntTSL 3 BASIC24.83■■□□□ 1.56
RIMBP3Q9UFD9 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
RIMBP3Q9UFD9 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC24.83■■□□□ 1.56
RIMBP3Q9UFD9 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC24.83■■□□□ 1.56
RIMBP3Q9UFD9 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC24.83■■□□□ 1.56
RIMBP3Q9UFD9 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC24.83■■□□□ 1.56
RIMBP3Q9UFD9 AL132994.2-201ENST00000603120 687 ntBASIC24.83■■□□□ 1.56
RIMBP3Q9UFD9 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 AC012317.2-201ENST00000623305 2251 ntBASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RIMBP3Q9UFD9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
RIMBP3Q9UFD9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 SNX15-201ENST00000352068 771 ntTSL 5 BASIC24.8■■□□□ 1.56
RIMBP3Q9UFD9 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms