Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 FAM86GP-201ENST00000448322 971 ntBASIC13.62□□□□□ -0.23
RNF7Q9UBF6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 AC243562.2-201ENST00000561247 970 ntBASIC13.62□□□□□ -0.23
RNF7Q9UBF6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 AC093028.1-201ENST00000622998 982 ntBASIC13.62□□□□□ -0.23
RNF7Q9UBF6 Z92544.3-201ENST00000624747 417 ntBASIC13.62□□□□□ -0.23
RNF7Q9UBF6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 AC008677.1-201ENST00000519230 1561 ntBASIC13.62□□□□□ -0.23
RNF7Q9UBF6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 TUBB3P1-201ENST00000405796 1332 ntBASIC13.62□□□□□ -0.23
RNF7Q9UBF6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF7Q9UBF6 AC063926.3-201ENST00000624734 5658 ntBASIC13.62□□□□□ -0.23
RNF7Q9UBF6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 AL513523.2-202ENST00000427283 2040 ntBASIC13.61□□□□□ -0.23
RNF7Q9UBF6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 AC105021.1-202ENST00000570572 669 ntBASIC13.61□□□□□ -0.23
RNF7Q9UBF6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF7Q9UBF6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms