Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
HACD3Q9P035 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.39■□□□□ 0.21
HACD3Q9P035 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 MIR346-201ENST00000362234 95 ntBASIC16.39■□□□□ 0.21
HACD3Q9P035 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.39■□□□□ 0.21
HACD3Q9P035 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 KRT18P13-201ENST00000400056 1290 ntBASIC16.39■□□□□ 0.21
HACD3Q9P035 AC211486.1-202ENST00000416371 468 ntBASIC16.39■□□□□ 0.21
HACD3Q9P035 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 AC142381.1-201ENST00000426099 345 ntBASIC16.39■□□□□ 0.21
HACD3Q9P035 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.39■□□□□ 0.21
HACD3Q9P035 AC245100.5-201ENST00000452108 331 ntBASIC16.39■□□□□ 0.21
HACD3Q9P035 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.39■□□□□ 0.21
HACD3Q9P035 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.39■□□□□ 0.21
HACD3Q9P035 AC211476.1-201ENST00000503899 468 ntBASIC16.39■□□□□ 0.21
HACD3Q9P035 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
HACD3Q9P035 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.39■□□□□ 0.21
HACD3Q9P035 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.39■□□□□ 0.21
HACD3Q9P035 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.39■□□□□ 0.21
HACD3Q9P035 AP000842.3-202ENST00000569238 1080 ntBASIC16.39■□□□□ 0.21
HACD3Q9P035 AC024267.1-201ENST00000582320 895 ntBASIC16.39■□□□□ 0.21
HACD3Q9P035 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.39■□□□□ 0.21
HACD3Q9P035 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HACD3Q9P035 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.38■□□□□ 0.21
HACD3Q9P035 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
HACD3Q9P035 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.38■□□□□ 0.21
HACD3Q9P035 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
HACD3Q9P035 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.38■□□□□ 0.21
HACD3Q9P035 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.38■□□□□ 0.21
HACD3Q9P035 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HACD3Q9P035 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.38■□□□□ 0.21
HACD3Q9P035 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.38■□□□□ 0.21
HACD3Q9P035 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 MIR648-201ENST00000385046 94 ntBASIC16.38■□□□□ 0.21
HACD3Q9P035 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.38■□□□□ 0.21
HACD3Q9P035 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.38■□□□□ 0.21
HACD3Q9P035 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.38■□□□□ 0.21
HACD3Q9P035 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.38■□□□□ 0.21
HACD3Q9P035 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.38■□□□□ 0.21
HACD3Q9P035 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.38■□□□□ 0.21
HACD3Q9P035 AC055717.3-201ENST00000622967 595 ntBASIC16.38■□□□□ 0.21
HACD3Q9P035 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HACD3Q9P035 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.38■□□□□ 0.21
HACD3Q9P035 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
HACD3Q9P035 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.38■□□□□ 0.21
HACD3Q9P035 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 AL596087.1-201ENST00000400979 1969 ntBASIC16.38■□□□□ 0.21
HACD3Q9P035 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.38■□□□□ 0.21
HACD3Q9P035 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.38■□□□□ 0.21
HACD3Q9P035 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HACD3Q9P035 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
HACD3Q9P035 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HACD3Q9P035 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.37■□□□□ 0.21
HACD3Q9P035 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HACD3Q9P035 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HACD3Q9P035 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HACD3Q9P035 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HACD3Q9P035 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HACD3Q9P035 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HACD3Q9P035 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.37■□□□□ 0.21
HACD3Q9P035 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms