Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CALYQ9NYX4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.4□□□□□ -0.27
CALYQ9NYX4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.4□□□□□ -0.27
CALYQ9NYX4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 SPCS2P4-201ENST00000436160 681 ntBASIC13.39□□□□□ -0.27
CALYQ9NYX4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 KRT8P48-201ENST00000515599 1220 ntBASIC13.39□□□□□ -0.27
CALYQ9NYX4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 PAUPAR-201ENST00000630360 2965 ntBASIC13.39□□□□□ -0.27
CALYQ9NYX4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CALYQ9NYX4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CALYQ9NYX4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CALYQ9NYX4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CALYQ9NYX4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CALYQ9NYX4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CALYQ9NYX4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CALYQ9NYX4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CALYQ9NYX4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CALYQ9NYX4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CALYQ9NYX4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 AC142381.1-201ENST00000426099 345 ntBASIC13.38□□□□□ -0.27
CALYQ9NYX4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 AP000842.3-202ENST00000569238 1080 ntBASIC13.38□□□□□ -0.27
CALYQ9NYX4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CALYQ9NYX4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 FOXO1B-201ENST00000504678 1527 ntBASIC13.38□□□□□ -0.27
CALYQ9NYX4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 AC067930.6-201ENST00000623257 4947 ntBASIC13.38□□□□□ -0.27
CALYQ9NYX4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CALYQ9NYX4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CALYQ9NYX4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.38□□□□□ -0.27
CALYQ9NYX4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms