Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 AZGP1P1-201ENST00000411909 902 ntBASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 AL033527.5-202ENST00000641632 1098 ntBASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 AC087499.5-201ENST00000452760 1342 ntBASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM248Q9NWD8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 AL365203.3-201ENST00000609742 2057 ntBASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 TSSK5P-201ENST00000423978 907 ntBASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 PHKG1P2-201ENST00000457537 863 ntBASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 AL390754.1-201ENST00000619088 582 ntBASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 MIR6069-201ENST00000620069 79 ntBASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.41■□□□□ 0.22
TMEM248Q9NWD8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms