Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 AC027601.4-201ENST00000611259 610 ntBASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 AC022532.1-201ENST00000624563 1728 ntBASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 KRT18P58-201ENST00000527480 1120 ntBASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 FAM197Y3-203ENST00000618346 717 ntBASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms