Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
SMC4Q9NTJ3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 AP001282.1-201ENST00000531301 1499 ntBASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 AP001160.2-201ENST00000596071 487 ntBASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 AC018529.1-201ENST00000613063 361 ntBASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 AC079781.4-201ENST00000641908 219 ntBASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 PRAL-201ENST00000624952 3286 ntBASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC4Q9NTJ3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 AL139400.1-201ENST00000366220 510 ntBASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 AL691432.1-201ENST00000596308 1422 ntBASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMC4Q9NTJ3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 AC109322.1-201ENST00000524499 1264 ntBASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 BANF1P1-201ENST00000553684 263 ntBASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 AC003101.2-201ENST00000612557 442 ntBASIC20.68■□□□□ 0.9
SMC4Q9NTJ3 MIR6080-201ENST00000617359 66 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms