Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 DKFZP434H168-201ENST00000567381 1905 ntBASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 TMBIM7P-203ENST00000641617 1718 ntBASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 AC016027.1-202ENST00000607927 1699 ntBASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 AC138035.3-201ENST00000622706 2791 ntBASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 KRT18P1-202ENST00000452408 1331 ntBASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 SNX33P1-201ENST00000592116 1762 ntBASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 KRT8P39-201ENST00000396270 1433 ntBASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 KRT17P6-201ENST00000453795 1220 ntBASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 BNIP3P18-201ENST00000593976 575 ntBASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 AC010331.1-201ENST00000611423 582 ntBASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 AC136621.1-201ENST00000624017 2304 ntBASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SND1-IT1Q9HBX3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms